Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1369 |
Symbol | |
ID | 5190409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1537898 |
End bp | 1539238 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640585834 |
Product | major facilitator transporter |
Protein accession | YP_001266711 |
Protein GI | 148546609 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.428314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACA ACAATACGTT GACGGAGTCC GTCGCCATGC CTGAGCCTGG AATCGAACGT AAGACGAAAG CCAAGAAGGC CACTGCGGCA GCCGTCTTTG GTACGTTCGT TGAGTATTAC GACTTCAGCA TCTACGGATA CCTTGCTGCC ACCCTTGCTC TGGTCTTCTT TCCTTCGGAC GATCCGACAA CAGGGTTGCT CAACACCTTC CTGGTCTTCG GCTCGGCATT TCTTGTCCGC CCGATTGGCG CAGTAGCGTT CGGCTGGCTC GGGGACAAGG TAGGACGTCG AGCAAGCCTG ATTGCGAGCA TCACCCTGAT GGGGGCTGCC GCGACACTCA TCGGCCTGTT GCCTGGCTAT GCGCAAATCG GCGTCTGGGC CCCTATTCTC CTCGTTGCAC TTCGCATGCT GCAGGGCTTC TCTGCTGGCG GTGAAATCGG CGGCGCGGCC AGCTACATCC GTGAGTGGGC TCCAGCCAAT CGTCGCTCGC TGTACATTTC CTTCCTGCCG TCGATTGCAC AGTTCGGTAA AGGGCTCGCC GCAGCCATCG CCGGTCTTGC AGCTGCATGG CTGACCGACC CGCAGATGGC TGATTGGGGT TGGCGTATTC CTTTCCTGCT GGCTCTGCCG CTCGGCATCA TTGGCCTGTG GATGCGCCTT GGGATCGAAG ACAGCCCGGA ATTCGAATCG AAAAAAACCG ACGCGAACAA AGAACACAGC GCACCTTTCG CTGAGCTCGT GCGTGATTAC ATGCGCCCGC TCACCAAGGT CATGATGATC TCCCTGGTGC AGAACATCGG TACCTACATC GGCACTGTCT TCATCGCCGC GTACTTCAGC TCAATCTTGG GCTACTCGAA GGGTCAAGCC TCCACCATCG TTCTGGTAGC AGTCAGCTTC GCAGCCCTGA TGATCCCGCT GGCAGGTCAC CTTGGCTCGA TCATCGGCAG CAAAGCCGTG CTGCGCCTGG CCTACCTCGG CTACGCAGTT CTTTCCGTCC CATCGTTCCT CCTCATGCAG CAAGGCCAGG TCAGCATGGC TATGGCTGGA CTGGCCCTGG GAATGATCCC TTACGCGCTG TGCCTGGCCG GCACCTACTC GGTCATGCCT GAGTTCTTCC CTACCCACGT TCGCCATACC GGCGTCGCGT TTGGCCACAG CGTTGGTGCC GTTATCGGCG GCGGCATTGG GCCTTTCATG GCCACCTGGC TAATCGGCGC GACCGGTAAC CAAACGGCAC CCGCTTTCAT CCTGAGCTGT GCCGGTGTTC TCGGCCTGAT CGTGTTGTGG ACTGTCCGCA ACCAAGCTGC CGCCGACGAC AAAAAACATC AATTCGCCTG A
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Protein sequence | MNNNNTLTES VAMPEPGIER KTKAKKATAA AVFGTFVEYY DFSIYGYLAA TLALVFFPSD DPTTGLLNTF LVFGSAFLVR PIGAVAFGWL GDKVGRRASL IASITLMGAA ATLIGLLPGY AQIGVWAPIL LVALRMLQGF SAGGEIGGAA SYIREWAPAN RRSLYISFLP SIAQFGKGLA AAIAGLAAAW LTDPQMADWG WRIPFLLALP LGIIGLWMRL GIEDSPEFES KKTDANKEHS APFAELVRDY MRPLTKVMMI SLVQNIGTYI GTVFIAAYFS SILGYSKGQA STIVLVAVSF AALMIPLAGH LGSIIGSKAV LRLAYLGYAV LSVPSFLLMQ QGQVSMAMAG LALGMIPYAL CLAGTYSVMP EFFPTHVRHT GVAFGHSVGA VIGGGIGPFM ATWLIGATGN QTAPAFILSC AGVLGLIVLW TVRNQAAADD KKHQFA
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