| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0821 |
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| Symbol | |
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| ID | 5191387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 917928 |
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| End bp | 919418 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585280 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001266168 |
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| Protein GI | 148546066 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.605291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.227561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC AATCCCCGCG TTTCGCAATC TACAGGTCGC ACCCCGAGCT GATCCTCAAT
CTGGGCAGTT GCCTTGCCGT GCTCGCCATC GTGGCCATCG TCAGCTACCT GCTTGCCCGC
GAGCGCGAGA GTGTCGAGCA GTCGGCGGTG CGCTCGTCGA ACAACATCGT CCAGCTGATC
GAAAGCGACA TTCTGCGCAA CGTCGAACTC TACGACCAAT CACTGCAAGG CCTGATCTGG
GCCGTCGGGC GCAAGGAACT GCCGGAAGTC CCCGGCCCGA TACGCCAGCG CCTGCTGTTC
AATGAAGCCT TTGTCGACCG CAAGCGCGGT GACGTGCTGT GGCTGGACAA GCAAGGCAAT
GTCGTCGGCG ACTCCACCAG CAACGTGCCA CGCAAGGCCA ACTTCGGCGA CACCGGGGTG
TTCAAGGCCC ACCAGCACAA TGCCAATCTC GGCTTGCTGG TGGGCCCCCC GTTCAAGGCC
AAGCTTGGCG ACCTGGACTG GTGTATCAGT TTCAGCCGAC GTATCTCCGG CCCCAATGGC
GAGTTCGCCG GGTTGGCAGC GGGTGCGCTG CGCCTGTCGT ACTTCAATGA GTTGTTCCAG
CGCCTGGACA TTGGCCACGA AAGCAGCATC AACCTGTTCA ATACCGATGG GCAGTTGCTC
GTCCGCCAGC CCTACCGCGG GCAGGACCCA CTGATTGGCA CCTACTACAC CGAACGGCCC
AATTTCAAAC GCATCCTCAG TGAACAGAGC GGTAGCTTCA CCGCCCGCTC CCACAGCAGC
GGCAAACTGC GCATGTTCAC CTTCGCCCGG GTCGCGCAGT TGCCACTGAT CGTGCTGGTG
GCGCACTCGG CCGACGAGGT TTTCGAGTCC TGGCGCCGCA CCGCCATTCT GGTCAGCGTC
GCCACCGGCG GTCTGTGCGT GGGCATTCTG TGGCTGACGT TGCTGCTTGG CCGCGAACTG
CGCCGCCGCC ACGAAGCCGA AGAAAACCTG GCGATGCTCG CTTCCACCGA TAGCCTGACT
GGCCTGGCTA ACCGCCGCAG GCTGGACCAT GTGCTTCGCC AGGAATGGGC CCGCGCCCAA
CGCAGCCGTA AGCCGCTGGC GATACTGATG GTGGACGTGG ACCACTTCAA GGCATTCAAC
CAGCGCCATG GCCATGCCGG TGGCGACCAT GCCTTGCGCG AAGTGGCGAA GGCCATCGAG
GCCTGCATTC GTCGCCCCGC AGACCTGGCT GCGCGCTATG GTGGGGAGGA GTTTCAGGTA
GTGCTGCCAG AAACCGATCT GGCCGGGGCC CAGCTACTGG CTGAACGCAT CCGCGCCAGC
GTCGAGGCGC TGGCGCCGTT TGCGGATGAT GCCCACGCAG TGACCGTGAG CATCGGTATC
GGTCTGTCCG GCACCCAGCA TGACCTTGGC AGGGTGCTGG GTGCTGCGGA CGAAGCGCTC
TACCGCGCCA AGGCCAATGG CCGAAATCGG GTAGAGGGCC CGCTCGATTA G
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| Protein sequence | MPTQSPRFAI YRSHPELILN LGSCLAVLAI VAIVSYLLAR ERESVEQSAV RSSNNIVQLI
ESDILRNVEL YDQSLQGLIW AVGRKELPEV PGPIRQRLLF NEAFVDRKRG DVLWLDKQGN
VVGDSTSNVP RKANFGDTGV FKAHQHNANL GLLVGPPFKA KLGDLDWCIS FSRRISGPNG
EFAGLAAGAL RLSYFNELFQ RLDIGHESSI NLFNTDGQLL VRQPYRGQDP LIGTYYTERP
NFKRILSEQS GSFTARSHSS GKLRMFTFAR VAQLPLIVLV AHSADEVFES WRRTAILVSV
ATGGLCVGIL WLTLLLGREL RRRHEAEENL AMLASTDSLT GLANRRRLDH VLRQEWARAQ
RSRKPLAILM VDVDHFKAFN QRHGHAGGDH ALREVAKAIE ACIRRPADLA ARYGGEEFQV
VLPETDLAGA QLLAERIRAS VEALAPFADD AHAVTVSIGI GLSGTQHDLG RVLGAADEAL
YRAKANGRNR VEGPLD
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