Gene PputW619_5008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5008 
Symbol 
ID6114000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5533045 
End bp5534010 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID641624822 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001751853 
Protein GI170724165 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC GCAACATCGA CAACCCGGCC ATCATTGCTC TGCTGTCTCG CCTTGAAGAC 
GTCGACGCAG GTGTGCGGCG CATCGCGCTG ATCGAGCTGG CCGACCTGGA AGACCCGGAC
GGTTTGCCTT GGCTCACCGA TGCGCTGTTG GTCGATGCGG CCGATGAGGT GCGCACTGAA
GCCGCGCGGC TGCTCGAAGC GTGGGAAGAG CCAGAGGTGG TACAGGCCCT ATGCGCTGCG
TTGGCCGATC CTGCCGAGCC GGTGCGCCTG GCCGCAGCGC AGAGCCTCAG TGAACTCAAG
AGCCTGGAAG CCGGGCAACT GATCCTGCCT TGGGTCAGCC ACGCAGCGGC CTTTGTTCGC
ACCAGCGCCC TGCGTGCCCT GCGCGAACTG CGCCTGGAAG ATGCCGCAGC GCCTGCGCTG
CTCGCGCTGG CGGATGACGA TGCGGCCGTG CGACGTGAGG CGGTGGGCAT CCTTGGTTGG
CTCAAACACG AGCCCGCGGT GCCGGCACTG GCAAGGCTGG CCGAGGGTGA GCCGGACGCG
CAAGTGCGTC GCGCAGCTAT TGGTGCGCTA GGGCTTGCGC GTGGCAGCTC CGTGCTGCCT
GCGCTGGTGG CAGCGTTGAA CGATGCGGTC TGGCAAGTGC GTGAAGAAGC TGCGACCACC
CTGGGCAAGG TAGGCCAGGC TGAGGCTGGG CCGGCGCTGG TGGATGCACT TGCCGACGGT
TTCTGGCAGG TACGCCTGCG TGCGGCGCGT TCACTGGGAC GCCTGCGCTA TGCCGCTGCA
CTGGATGCCC TTGGCGATCT GCTCGGGCAC GGCATCGCCA ACCTTCGCAA GGAGGCGGCC
TTGGCCCTCG GCGAGCTGGG CCAGGCGCGT GCCTTGCCAT TGCTGCAGGC CGCCGAGGCC
GATAGCGACC CGGAGGTGCG CAAGGCGGTG CGCATTGCCT TGGCGCAATT GCGCGGGGTG
GCGTGA
 
Protein sequence
MTERNIDNPA IIALLSRLED VDAGVRRIAL IELADLEDPD GLPWLTDALL VDAADEVRTE 
AARLLEAWEE PEVVQALCAA LADPAEPVRL AAAQSLSELK SLEAGQLILP WVSHAAAFVR
TSALRALREL RLEDAAAPAL LALADDDAAV RREAVGILGW LKHEPAVPAL ARLAEGEPDA
QVRRAAIGAL GLARGSSVLP ALVAALNDAV WQVREEAATT LGKVGQAEAG PALVDALADG
FWQVRLRAAR SLGRLRYAAA LDALGDLLGH GIANLRKEAA LALGELGQAR ALPLLQAAEA
DSDPEVRKAV RIALAQLRGV A