Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4404 |
Symbol | |
ID | 6113374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4864218 |
End bp | 4865048 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641624199 |
Product | signaling modulator of AmpD, AmpE |
Protein accession | YP_001751253 |
Protein GI | 170723565 |
COG category | [V] Defense mechanisms |
COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.154037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTC TGGTGTTGAT ACTGGCGTTG TGGGTCGAGA AGTTCTCCGC CCTGCGCCAT CAGGTACAGC GCGATGGCTT CTTCCTGGGC GAGCTGGTGC GCCTGGAGCG CAGCGGGAGG GTGCATCCCT GGTGGAGCCT GGCCATCCTG GTGCTTGCAC CCGTGGCAGT GCTGGTGTTG CTGCTGCACG TGCTCGACCC GGTGGCCTAT GGTTTGCTGG CCCTGCCGGT GCACCTGCTG GTGCTGATCT ACAGCCTCGG CCGTGGCGAT GCCAAGGCCG CCCTTGGGCC GTTTCGCGAT GCCTGGCGGC GCGGCGACGA CCAGGCCGCG CTGCATGTGG CCGAGCGCGA CCTGGGCCTG GTAGCTGATG AACCCCAGGC TTTGCTGGTG CGCGTGCAAG GCTACCTGTT GTGGCAGGCC TATCAGAGTT TCTTCGCCGT GATCTTCTGG TACTTCGTGC TCGGCCCCGG GGCGGCGCTG GCCTATCGCC TGCTGGCGCT GACAGGCGAT AACAGTTGCC AACCTGCACT CAAGGCCCGG GCCGAGCAGC TGCGGCACAT CATGGACTGG CTTCCGGTGC GCGTGTTGGC CCTGAGTTTC GCCCTCGTCG GCAATTTCGT CGCAGTGACC CGCGTGATGC TGCACGAACT GCTCAACTGG CACATCAGCG CCGGTCACCT GGTGGCCAGG GTCGGGCGGG TTGCCGATGA CATTCCCGAC CAAGAGGACA GCCAGCGCGG TCTGGCTAGG CTCGATAGCC TGTGGGAGCT GCTGCTGCGC TGTGCGGTGC TGTGGTATGC GGGCTTTGCG TTGTGGACGG TGCTGGTCTG A
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Protein sequence | MSFLVLILAL WVEKFSALRH QVQRDGFFLG ELVRLERSGR VHPWWSLAIL VLAPVAVLVL LLHVLDPVAY GLLALPVHLL VLIYSLGRGD AKAALGPFRD AWRRGDDQAA LHVAERDLGL VADEPQALLV RVQGYLLWQA YQSFFAVIFW YFVLGPGAAL AYRLLALTGD NSCQPALKAR AEQLRHIMDW LPVRVLALSF ALVGNFVAVT RVMLHELLNW HISAGHLVAR VGRVADDIPD QEDSQRGLAR LDSLWELLLR CAVLWYAGFA LWTVLV
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