| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4395 |
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| Symbol | |
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| ID | 6113365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 4851987 |
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| End bp | 4853483 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624190 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001751244 |
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| Protein GI | 170723556 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC GATTACCGCG TCTCGCACTC TACAGGTCGC ACCCCGAGCT GATCCTCAAT
CTGGGCAGTT GCATCGCCGT GCTCGCTATC GTGGGCATCG TCAGTTACCT GTTGGGGCGC
GAGCGCGAGA GTGTCGAGCA ATCGGCCATC CGCTCCTCCA GCAATATCGT CCAGCTGATA
GAAAGCGACA TCCTGCGCAA TGTCGAACTT TACGACCAAT CATTGCGCGG GCTGATCTGG
GCGGTGCAGC ATCCCGAACT GCTGCAGGTC GCGCCCAACC TGCGCCAACA GATCCTCTTC
AACCAGACGT TCGCGGCCCC GGTGCGCGGC GATATTCTCT GGCTCAATGC CAATGGCGAC
GTCGTGGGCG ACTCCACCAG CGTCACCCCG CGCCAGGCCA ATTTCGCCGA CACCTTCGAC
TTCCGGGCCC ATCGCCGCGA CCCTGGCCTG GGCTTGTTGA TCAGCCCGCC TTTCAAGGCA
CGGCTCGGCG ACCTTGACTG GTGCATCAGT TTCAGCCGGC GCATCTCCGC AGCCGATGGC
AGCTTTGCCG GGCTGGCCGC CGGTGCCCTG CGCCTCTCCT ATTTCAGCGA ACTGTTCCAG
CGCCTTGATA TCGGCCATGA AAGCAGCATC AACCTGCTCA ACGTCGACGG CCAGTTGCTC
GCCCGCCAGC CGCGCCGCGA CCAGGACCCG TTGATCGGCA CCAGCTTTGC CGACCGCCCC
AACTTCAAAC GCATCCTGGG CGAGCGCAGC GGCAGCTTTA CAGCCCGCTC CAGCATCTAT
GGCACCCAGC GCATGTACAC CTTCGCCCGG GTCGCCGAGC TGCCGTTGAT CATACTGGTG
GTGCACTCAA GCGATGAGGT GTTCCAGTCA TGGCGCCGCA CGGCGTTGGT GGTCAGTATC
GCCACAGGCG TGCTGTGCAT TGGCATTCTC TGGCTCACCC TGCTGCTGGG CCGCGAATTG
CGCCGCAGGC ATGAGGCCGA GCAGGGTCTG GCCACGCTGG CAGCAACGGA TAGCCTGACG
GGCCTGGCCA ACCGTCGCCG GCTGGATCAG GTGTTACGCC AGGAATGGGC GCGCGCCCAG
CGCAACCGTA AACCGTTGGC CGTGCTGATG GTGGATGTGG ATCACTTCAA GGCCTTCAAC
CAGCGCCATG GGCACGCTGG AGGCGATCAC GCCTTACGTG AAGTGGCCAA GACGATCGAA
CAGTGCATAC GACGCCCGGC GGACCTGGCG GCGCGTTATG GGGGTGAGGA ATTTCAGGTG
GTTTTGCCGG AAACCGAACT GGCCGGCGCC CGCTTGTTGG CAGAGAGGAT CCGCACCCGA
GTCGAGGCAT TGGCACCTTT TGCCGATGAT GCACACGCGG TGACGGTGAG TATCGGCATC
AGCGTCCACA CCCCCGGCAC CCAACAAGAC CTGACGACCA TGCTGGGTGC CGCGGACGAG
GCGCTCTACC GGGCCAAGGC CAAGGGCCGA AACCGGGTAG AGGGCCCTGC GGATTAG
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| Protein sequence | MPTRLPRLAL YRSHPELILN LGSCIAVLAI VGIVSYLLGR ERESVEQSAI RSSSNIVQLI
ESDILRNVEL YDQSLRGLIW AVQHPELLQV APNLRQQILF NQTFAAPVRG DILWLNANGD
VVGDSTSVTP RQANFADTFD FRAHRRDPGL GLLISPPFKA RLGDLDWCIS FSRRISAADG
SFAGLAAGAL RLSYFSELFQ RLDIGHESSI NLLNVDGQLL ARQPRRDQDP LIGTSFADRP
NFKRILGERS GSFTARSSIY GTQRMYTFAR VAELPLIILV VHSSDEVFQS WRRTALVVSI
ATGVLCIGIL WLTLLLGREL RRRHEAEQGL ATLAATDSLT GLANRRRLDQ VLRQEWARAQ
RNRKPLAVLM VDVDHFKAFN QRHGHAGGDH ALREVAKTIE QCIRRPADLA ARYGGEEFQV
VLPETELAGA RLLAERIRTR VEALAPFADD AHAVTVSIGI SVHTPGTQQD LTTMLGAADE
ALYRAKAKGR NRVEGPAD
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