| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3946 |
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| Symbol | |
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| ID | 6112910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 4375744 |
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| End bp | 4377432 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641623735 |
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| Product | terminase |
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| Protein accession | YP_001750795 |
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| Protein GI | 170723107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.087061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACT GGACAACTGC ATGCCCTGAC TGGGAGCAGC GCATCGTTGC GCGCAAGAGT
CTGATTCCGT TCAAGCCGCT GTTTCCGACT GAGGCCGAGG AAGCCCTCGA CGTATTCGGT
GCGCTCCGGA TGGTCGATGC CACCGGTAGC CCGCTGATGT CCGAGACTGT GCGCGACTGG
GTCAACCAGT TCGTGGCCGC CATATTCGGC GCCTATGACC CCGACGAGGG GCGTCGCCTG
GTCAGCGAGT TCATGCTCCT GATCAGCAAG AAGAACGGCA AGTCGACGAT TGCCGCTGGC
ATCATGCTAA CGGCCTTGAT CCTCAATTGG CGGCCCTCGG GTGAGTTCAT CATCCTGGCG
CCGACCAAGG AAATCGCGGA CAACTCCTAC ATTCCGATCC GCGACATGGT GCGGGCCGAT
GAAGAATTAG ACGCCTTGCT CAAAGTGCAG GACCACCTGC GCACCGTTAC CCATCGGCAG
ACCAACGCCA CGCTCAAGGT GGTGGCCGCC GACAGCGAGA CCGTTTCAGG CAAGAAGGCC
ATCGGCGTGT TCGTCGATGA GCTGTGGGTA TTCGGCAAGC GTGCGAATGC CGAAGCCATG
TTGCGCGAGG CCACGGGTGG ATTGGCGTCT CGGCCAGAGG GTTTCATCAT CTGGGCAACG
ACCCAGTCTG ATGCGCCGCC GGCCGGCGTG TTCCGGCAGA AGCTGCTGTA TGCCCGCAAG
GTGCGCGACG GCGAGATCGT CGACAAGTCG TTCTTGCCGG TGCTGTACGA GTTCCCCAAA
GCGATGCTCG ATGCTGGGGC GCACCGGGAT TTCTCCAACG CCTATATCAC CAACCCCAAT
CTGGGGCTGT CGGTCGATGA ACCCTTCATC GAACGTGGAT ATGCCCAAGC GCAGATGGAT
GGGGAAGAGT CATTCCGCGG ATTCTTGGCC AAGCACCTCA ACGTCGAGAT CGGCCTGGCC
CTGTTGTCCG ATCGCTGGGC TGGCACTGAT TACTGGGAGC AGCAAGCTTC CGAGCTGTGC
AAGACCCTGG ATGATCTGAT CGAGCGCTGC GAGGTGATCG ACATCGGGAT CGACGGCGGG
GGGCTGGACG ACCTGCTGGG GCTGGCTGCC ATCGGGCGTG AAATAGGCAC GCGGCGCTGG
CTGACCTGGA CTCACGCCTG GGCGCATCCA TCGGTGCTGG AGCGCCGAAA GTCAGAAGCA
CCGCGCATTC GGGACTTCGC CAAGGATGGG CACCTGACAC TGGTCAAGCG GATCGGTGAT
GACATTGATG ACGTGGCCCA GTTGGTCGCG AAGGTCGAGC AGGCCGGGCT GTTGGACAAG
GTCGGGCTCG ACCCAGCTGG TGTCGGCGCG ATTCTCGATG CCCTGGAGGC GGCCGGGATA
CCCCGCGACA AGATCGACGG CATTTCGCAG GGCTGGCGCT TGGGCGGATC AATCAAAACT
GCGGAACGCA AGCTGGCAGA GGGCGCCCTG CTGCACGGCG GCCAGCCGAT GATGGCGTGG
TGCTGCGGCA ATGCTCGTGT CGAGCCGCGA GGCAACTCGA TACTGATCAC GAAGCAGGCC
AGCGGCTCGG CGAAGATCGA CCCGCTCATG GCGCTGTTCA ATGCTGTGAC GCTGATGGCC
CTCAATCCAG AAGCGAAGAG CGGCATGGAC AACTACCTCA ACCACGGCTT CTTCGACCTC
ATAGGCTGA
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| Protein sequence | MMDWTTACPD WEQRIVARKS LIPFKPLFPT EAEEALDVFG ALRMVDATGS PLMSETVRDW
VNQFVAAIFG AYDPDEGRRL VSEFMLLISK KNGKSTIAAG IMLTALILNW RPSGEFIILA
PTKEIADNSY IPIRDMVRAD EELDALLKVQ DHLRTVTHRQ TNATLKVVAA DSETVSGKKA
IGVFVDELWV FGKRANAEAM LREATGGLAS RPEGFIIWAT TQSDAPPAGV FRQKLLYARK
VRDGEIVDKS FLPVLYEFPK AMLDAGAHRD FSNAYITNPN LGLSVDEPFI ERGYAQAQMD
GEESFRGFLA KHLNVEIGLA LLSDRWAGTD YWEQQASELC KTLDDLIERC EVIDIGIDGG
GLDDLLGLAA IGREIGTRRW LTWTHAWAHP SVLERRKSEA PRIRDFAKDG HLTLVKRIGD
DIDDVAQLVA KVEQAGLLDK VGLDPAGVGA ILDALEAAGI PRDKIDGISQ GWRLGGSIKT
AERKLAEGAL LHGGQPMMAW CCGNARVEPR GNSILITKQA SGSAKIDPLM ALFNAVTLMA
LNPEAKSGMD NYLNHGFFDL IG
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