| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2609 |
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| Symbol | |
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| ID | 6111560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2892033 |
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| End bp | 2892785 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641622398 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001749472 |
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| Protein GI | 170721784 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.328906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAG GCTTGCAGGG TAAGCGGGTG CTGGTCAGCG GCGCCTCCCG AGGCATTGGC
CGAGCTATCG TGAAGTTGTT TCTCGAGGAA GGCGCCCAAG TGGCGTTCTG TGCTCGGGGG
CAAACAGGCG TTCAGAGCGC GCAACTCGAG TTTGGCGAGC GCGCTTGGGG CACTGCGGTG
GATGTTACCC AGCCCGAGCA TGTCCGGGCC TGGGTCAATG AAGCAGCGCA GCATATGGGC
GGGCTGGATA TCGTCGTGCC CAACGTCAGT GCTTTGGCTG GGGGTGATGA CCTGGAGACC
TGGCGGCGAG CGTTCGACAC CGACCTGTTG GGCAGTGCAA CGATGGTCAA AGCCGCCCTG
CCCGCCCTTC GTCAATCACA AGCGGCAGCG GTCGTGCTCA TATCGAGCGT CTCGGGGCGC
GAGGTCGATA TGTTCGCAGA ACCCTATGGC GTTCTGAAGG CAGCCTTGCT TCACTACGGC
AAGACCCTCT CGGTGCGCCA TGCCCATGAG GGTATCCGCG TTAACTCCGT TTCTCCAGGC
AATGTGTATT TCCCTGAAGG CGTGTGGGGA GATATAGAAC GAGAACAACC CGATACCTTC
GCCAAATCCC TGGCCGAAAA CCCGATGGGG CGTATGGCTA CTCCGGAAGA GGTCGCTAAA
GCGGTGGTGT TCCTGGCCAG TCCCGCGGCA AGTTTCACAA CCGGTACCAA CCTTCTGGTC
GATGGTGGCC TGACGCGCTC AGTGCAATTC TGA
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| Protein sequence | MDLGLQGKRV LVSGASRGIG RAIVKLFLEE GAQVAFCARG QTGVQSAQLE FGERAWGTAV
DVTQPEHVRA WVNEAAQHMG GLDIVVPNVS ALAGGDDLET WRRAFDTDLL GSATMVKAAL
PALRQSQAAA VVLISSVSGR EVDMFAEPYG VLKAALLHYG KTLSVRHAHE GIRVNSVSPG
NVYFPEGVWG DIEREQPDTF AKSLAENPMG RMATPEEVAK AVVFLASPAA SFTTGTNLLV
DGGLTRSVQF
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