| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2528 |
|---|
| Symbol | |
|---|
| ID | 6111480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2813055 |
|---|
| End bp | 2813906 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641622321 |
|---|
| Product | YD repeat-containing protein |
|---|
| Protein accession | YP_001749395 |
|---|
| Protein GI | 170721707 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACATA GAAGTGGCTG CCAACGTTGT CTCAGCCACT TCTTGCGTTT TCTCGCCACC
GGCGGCACCC GCGTACACCT ACAGTACGAC AACCTGCTGG GCCGGCTGAC CGACATCAAG
CGGGTGGTCG ACAACCTGGC CGTCGAAACG CTGACCCAGT ACCGCTACGA CGAACACGGC
CAGCTAAGTG CCGTGATCAA CCGCAACGGC GACACCGTGC GCAGCTTCAG CTACGCAGAC
GGCGTAATGG CAAGCCACAG CAATGCCCTG GGCCTGACCT GCCATTATCG TTGGGAAACC
CTCGACGGCC AGCCCCGCGT GGTCGAGCAC TGGACCAGCG ACGGCGAACA CTTCCATTTC
CGCTACGACT TCGCCCAGCG CATCAGCTGG GCCACGGACG TACTCGGCCG CGAGTTGGAG
GTGCAGTACA ACGCCGACCA CCGCGTTTTT GCCAGCCACT ACGGCGGCGA GCGCTACGCC
ATCGCGCTGG ACGACTACGG CAACATGTTC GGCCTGACCC TGCCGGACGG CAACCAGTTG
CACTTCAAGT ACGACGAATA CGCCCGCCTG CTCGAAGAGA CCGACCCGCT GGGCCGCACC
ATCGCCTACG AATACCACCA CCTGACCACC CTGGTAACCA AGGTCACCTA CCCGGACGGC
AGCACCTGGC AGGCGCGCTA CGACGACAAG GGCAACCTGC TCGCCGAAAC CGATGCCCTG
GGCCACCTGA CCGAGTACCT CAATGGCGAA GATGGTTTGC CGCATACCAT CATCGATGCA
AGCTACAAGT CCAAGTACCT GTGGTGGAAC ACCCTGGCCC AGGTCGAACG CTATCAGGAC
TGTTCGGGTT AA
|
|---|
| Protein sequence | MRHRSGCQRC LSHFLRFLAT GGTRVHLQYD NLLGRLTDIK RVVDNLAVET LTQYRYDEHG
QLSAVINRNG DTVRSFSYAD GVMASHSNAL GLTCHYRWET LDGQPRVVEH WTSDGEHFHF
RYDFAQRISW ATDVLGRELE VQYNADHRVF ASHYGGERYA IALDDYGNMF GLTLPDGNQL
HFKYDEYARL LEETDPLGRT IAYEYHHLTT LVTKVTYPDG STWQARYDDK GNLLAETDAL
GHLTEYLNGE DGLPHTIIDA SYKSKYLWWN TLAQVERYQD CSG
|
|---|
| |