Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2408 |
Symbol | |
ID | 6111361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2677683 |
End bp | 2679074 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641622203 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001749277 |
Protein GI | 170721589 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0406486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTGC TGAACCCGTC TAAGGGCTGG AGCTCCTCGA CCAGCCGCCT GCTGGCGCTG TACAGCTTCC TCTTCGTGGC GTGGAGCAGC ATCCTCATGG GGGTGCTGTA CTTCGAGGTT TCCAGCTACC TGAACAAGCT GACCCGCCAT TCCATGCTGC AGCGCCAGCA CCTGTTCGCG CACATGAGCG GCAAGCAGCT GGACGACGCA CTGATCGCCA GCCAGGCGTT CGAGGAACGC GCCTTTGATG CTTACGGCCT GTTCGACGCC CAGCTAAACC CGATCGGCGG GCGTATCCGT GCAATTCCGC CGGAACTCGG CCTGGACGGC AAGGTACATG AACTGGAGCG TTGCCTGGAC GCCGATGACC CGCACATGCC ACGTGACAGC TGCGACGCGG TGGCAATCAA GGTTCAGGAC GGCCGCTGGC TGGTACTGCT GCGCGACAAC GGCTCGTTGT TCGTGGTGAC ACGCATCATC CTGCACGCCT TGCTATGGGG CATATCGCTG ACACTTATCC CGGGCTTCGC CGGCTGGTAC CTGCTGCGCC GCAGGCCTTT GAAACGCATT CGGGCCATAC AGGCGCAGGC AGAGCTGATC GTCGCCGGCG ACCTCACCCA CCGCCTGCCG CTGTCGGCCC GGCGCGACGA GCTGGACATG CTGGCCGCCA TCGTCAACGC CATGCTTGAC CGGATAGAAC GGCTGATGCA TGAGGTCAAG GGCGTGTGCG ACAACATTGC CCACGACCTG CGCACACCAC TCACCCGCCT GCGTGCACAG CTGTACCGCA TCCGCCAGCA GACCGGGCTG GACTCGGCAC AAGCCGAGGC ACTGGACCAG GCCATCGGCG AAACCGATAC CCTGATGGCA CGTTTTCGCG GCCTGTTGCG CATCAGTGAA CTGGAGGATC GCCAGCGCCG CGCTGGCTTC GTTCAGCTGG CCCCGCGTGA GCTGCTGGTG GAGTTGCATG ATTTCTACCT GCCCCTGGCC GAAGATGGCG GTATTCGCCT GCAGCTGCAA CAGCCTGAGC ACTTGCCGGC GCTGCATGGG GACCGCGAGT TGCTGTTCGA AGCGCTGGCC AACCTGGTGG GCAATGCCAT CAAGTTCACG CCAGAAGGTG GCCGGGTGGC CATTACGGCT ACGCAGGACG AAGCAGGCGT GCATATCGCT ATCGAGGACA GCGGACCCGG GATTCCGGAG GAAGAGCGGA CTGCAGTGCT GAAGCGGTTT TATCGCAGCG AGGAAGGACA CCGTCACCCG GGGTTCGGGC TGGGGTTGTC GATCGTTGCG GCGATCGTCG ACCTGCATGG GTTTGAGCTG GTGGTGGGTG ATAGTGAGCT GGGTGGGGCC AAGCTGGTGT TGCATTGCCC GTTGGCGGGG TTGCCCAGGT AA
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Protein sequence | MPLLNPSKGW SSSTSRLLAL YSFLFVAWSS ILMGVLYFEV SSYLNKLTRH SMLQRQHLFA HMSGKQLDDA LIASQAFEER AFDAYGLFDA QLNPIGGRIR AIPPELGLDG KVHELERCLD ADDPHMPRDS CDAVAIKVQD GRWLVLLRDN GSLFVVTRII LHALLWGISL TLIPGFAGWY LLRRRPLKRI RAIQAQAELI VAGDLTHRLP LSARRDELDM LAAIVNAMLD RIERLMHEVK GVCDNIAHDL RTPLTRLRAQ LYRIRQQTGL DSAQAEALDQ AIGETDTLMA RFRGLLRISE LEDRQRRAGF VQLAPRELLV ELHDFYLPLA EDGGIRLQLQ QPEHLPALHG DRELLFEALA NLVGNAIKFT PEGGRVAITA TQDEAGVHIA IEDSGPGIPE EERTAVLKRF YRSEEGHRHP GFGLGLSIVA AIVDLHGFEL VVGDSELGGA KLVLHCPLAG LPR
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