Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2275 |
Symbol | |
ID | 6111228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2533233 |
End bp | 2534207 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641622070 |
Product | TnpT protein |
Protein accession | YP_001749144 |
Protein GI | 170721456 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0467434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00186431 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCGCG CCGGAATCAA CAAAGCCCTC GTGCAGCGAG CACGGGATGC CCTCCTCGCC CGTGGTCTGT CACCCAGTAT CGAGGCCGTG CGTGCAGAAC TCGGCCACAC GGGCTCGAAG ACCACCATCC TTCGCTACCT GCGTGAACTG GACGTGGCAG AACCCCATCC GCCACAGGTG AACCTGTCGG AAGAATTGCA GGCGCTGCTG CAGAGTCTAG CTGAGCGTTT GGCGAGTGAA GCGCAGGCGA CGGTCGCCGT CGACCGCGCC CGCCTGGAGC GGCAACAAGC GGCCTATCAG CAACAGCGCG CGGTAGAGGG CGCGCGCTTC GAGCAGTTGC AAGTGGCACA TACCGCAGAG ATGGAGGCCC ATCGGCAGTT GCGTCTGCGG GAAGTGCAAC TGACGGGCCA ACTGCAACTG GCCGAAGGCG AGCGACGGCG CCTTGAAGAA GCCTGCCGGC AACAGCTTCA GCTCCTCGAG GAGCGTGCGA CGACGATCCA CTCGCTCGAG ACCAAACACC AGCAGGCACG TGAATCGCTG GAGCACTTTC GCCAACAGCA TCAACTGCAA CGCCAGGAAG AACTGCAGCG GCATGATCAG CAGTTAAGTC AGTTACAAAC CGAGGTGCGG GGATTGCGTG AACAACTCGC TGTCCGCCAG GAAGAACTGA CTCAACTCTA CCGAGATCTG GAACGTTCGA CCGGCGCTCA GGGCTACCAG CAGCAACAGC TCCGTCAGCT CGAGCGTGAG TTGAACGCCG CGCAACAGCA CTTGGCGGCC GAAAAGCTGC TCATGAACCA GGCGCATCAG CAGGCAGAAA TAATGGCGAG CGAGATCACC TTGCTACGCG AGAAGTCCAG GTCTTACCTC CTCGCCCACC GACATGACCA GCGCCTTCTG CGTGCGCAGG CGCAACAACT GGCACGCCTG CAAGGCTTGG TCGAGCCGGG GTCATCCGAC AGTCCAATTC CTTAA
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Protein sequence | MARAGINKAL VQRARDALLA RGLSPSIEAV RAELGHTGSK TTILRYLREL DVAEPHPPQV NLSEELQALL QSLAERLASE AQATVAVDRA RLERQQAAYQ QQRAVEGARF EQLQVAHTAE MEAHRQLRLR EVQLTGQLQL AEGERRRLEE ACRQQLQLLE ERATTIHSLE TKHQQARESL EHFRQQHQLQ RQEELQRHDQ QLSQLQTEVR GLREQLAVRQ EELTQLYRDL ERSTGAQGYQ QQQLRQLERE LNAAQQHLAA EKLLMNQAHQ QAEIMASEIT LLREKSRSYL LAHRHDQRLL RAQAQQLARL QGLVEPGSSD SPIP
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