Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1958 |
Symbol | |
ID | 6110911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2187500 |
End bp | 2188495 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641621755 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001748830 |
Protein GI | 170721142 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.350389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0245098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA CACCTCTCGA CACACAGGCC CGCGCCCCCG CGCGCCGCAG CGGCACCTAC TTCGGCCTCG GCACCTACCT GGGCCTTGCG GGCGCCTTGC TGGCCATGAT CGTGCTGTTT TCGTTGCTCA GCAGCCACTT CTGGTCGTAC GCCACCTTCA GCACCCTCGC CAACCAGATC CCCGACCTGA TGGTGCTGGC CGTGGGCATG ACCTTCGTGC TGATCATCGG CGGCATAGAC CTGTCTGTGG GGTCGGTGCT GGCGCTGGCG GCATCGGCAG TCAGCGTGGC CATCCTCGGC TGGGGTTGGA GCGTGCTGCC GGCCGCCTTG CTCGGCATGG CCGTCGCCGC GCTGGCCGGC AGCATCACCG GCGCCGTCAC GGTGGCCTGG CGCATCCCGT CGTTCATCGT CTCGCTGGGC GTGCTGGAAA TGGCCCGCGG CCTGGCCTAC CAGTTCACCG ACTCGCGCAC CGCCTACATC GGCGATGCCT ACGCCTGGTT CTCCAACCCG ATCGCCTACG GTATCTCGCC GGCCTTCATC ATTGCCTTGC TGGTGATCAT CCTCGCCCAG CTGGTGCTGA CCCGTACCGT GTTCGGCCGT CACCTGATCG GCATCGGCAC CAACGAAGAG GCCGTGCGCC TGGCCGGCAT CGACCCGCGC CCCTACAAGG TGCTGGTGTT CGCCCTGATG GGCCTGCTGG CAGGCTTGGC CGCGCTGTTC CAGATTTCCC GCCTGGAGGC CGCCGACCCC AATGCCGGCG CCGGCCTGGA GCTGCAGGTG ATTGCCGCCG TAGTGATCGG CGGCACCAGC CTGATGGGCG GGCGCGGCTC GGTCATCAGT ACTTTCTTCG GTGTGCTGAT CATCTCGGTG CTGGCCGCAG GCCTTGCACA GATAGGCGCC TCCGAACCCA CCAAACGCAT CATCACCGGG GCGGTCATCG TCATCGCCGT GGTGCTCGAC ACCTACCGTA GCCGGCGAGC AGGCCGGCGG AACTGA
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Protein sequence | MKTTPLDTQA RAPARRSGTY FGLGTYLGLA GALLAMIVLF SLLSSHFWSY ATFSTLANQI PDLMVLAVGM TFVLIIGGID LSVGSVLALA ASAVSVAILG WGWSVLPAAL LGMAVAALAG SITGAVTVAW RIPSFIVSLG VLEMARGLAY QFTDSRTAYI GDAYAWFSNP IAYGISPAFI IALLVIILAQ LVLTRTVFGR HLIGIGTNEE AVRLAGIDPR PYKVLVFALM GLLAGLAALF QISRLEAADP NAGAGLELQV IAAVVIGGTS LMGGRGSVIS TFFGVLIISV LAAGLAQIGA SEPTKRIITG AVIVIAVVLD TYRSRRAGRR N
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