| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1856 |
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| Symbol | |
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| ID | 6110807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2074608 |
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| End bp | 2076674 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621651 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001748728 |
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| Protein GI | 170721040 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.405305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0244044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCCG TGTTGCCCCC CTCACCCTGC ATTGGCTTTG TTGCCCTTTT CACTGTCGCC
CAGCACGTGT CTGCCGCGCC TGCGGTCGAA CTGGGCGAGG TGCTGATCAG TGACGAAGCA
CAAAGCGAAA TGGAAGACGC CCGCGAGCGC CTGCAGGCAG TGCCCGGTGC CAGCAATCTG
GTTGACATGC GGCGCGTGGG GCAAGGACGG GTGGCCAGCA ACCAGGACGT GCTGGCCTAC
CAGCCGGGGG TGTTCGCCCA GTCTGCTGGT AACGATGGCA TCAAGCTTTC CATCCGCGGA
TCAGGCATCA ACCGTGCGCC AGGAGCCCAT GGTTCAGGGG TGTACACGAT GTTCGACGGC
CTGCCGCTGA CTGGTCCGGG CGGTACACCT TACGAGCTGT TCGAGCCGCT GTGGCTGAGC
CGCGCCGAAG TGCGGCGAGG GGCCAACGGC TTCGATCAGG GCGCGCTGGC GCTGGGTGGG
GCAATCAACT ATGTGACGCA TACCGGCTAC GATGCCGCGC CGTTACAGGT GCGGTACGAG
GCCGGCAGCC GCGGTTATCA GCACAGGCAC GTCAGCTCGG GTCAGGTGTT GGGCAACCTC
GACTACTACG TAGCCCTCAC CGACTCGGAA TATGACGGCT ACCAGACGCA TAGCAGCGGC
AGCGCCAAAG GCATCGCTGC CAACGCTGGT TATCGCTTCA ACCCCAACCT GGAAACGCGC
TTCTACCTGC GCTACCGGGA AACCGAGAAC GAGCTGGCCG GGCGCCTGAC CAAGGACCAG
ATCAAACACG ACCCTCGTGC CGCCAACGCC GCCTACCTGG CGCGCGACGA CAGCCGGCCG
CAACCGGGCA GCACCTGGGC GGCCAACAAG ACCACCTTCT ACCTTGAGGA CGATGCCCGT
GTGGAAGCCG GGCTGGTGTA CCACGATTTC CCCATGGACC TGCGTGAAGG CCCGATGCGC
CTGAAGGTCG CCTACACCGA TGTCAGCGGC ACCCTTAACT ACGTGCGCCG CGACACCTTG
CTGGGCCATC AGAGCAACAC CACCGTGGGC TGGCGAACCA CCAAGCACCT GCCCAACAGC
GGCGCCTCGC AGTTTGCCCG CACCACTGGC GACAACTTCG GTGCACGCAG CCGCGACTTC
AGCTATCAGG GGTCGGATAC CGTCCTGCAT GTCGGCAACG ATCTGGAGCT GATCCCGGAC
CTGTGGCTGA CCACTGGCCT GGCGATGATC TATACCCGCC GTGAAAGCGC AGTCACCTAT
CCGCAGAGCG GTGGAAAGGT CAGCCAGCAT GACTGGGACT ACGCACCGCG CCTGGGCCTG
CGCTACGACA TCAACCCGCA ACTGCAGGTG TATGGCAACC TGAGCCGGTC CGTCGAGCCA
CCCCACCCAT GGTCACTGAT CTGGAGCTCC ACGGTCGCCA CGCAGCCGAT CGAACTGCAA
AACCAGACAG CCACCACGCT GGAACTGGGC GCGCGCGGCG ATTCGGCGCT GGGCCGCTGG
GACCTGGCCT GGTACTACTC GCAAGTGCGC CATGAACTGT TGGCCGTTGA AATCGAGGCA
GGGCTCCCGG CCAAGGAGGT CAATGCCAGC GCCACTTTGC ACCAGGGCGT CGAAGCCGGC
CTGGACAGCA CCCTCTGGGA GCACGCTGGC ACTGGCAAGC TCAGCTTGCG CCAGGCCTAC
ACGTTCAGTG ATTTCCACTA CCGGGACGAT GACACCTTCG GCGATAACCG CCTACCTGGC
ATTCCCGTGC ATTACTACCA GGCCGAACTG CGCTACGACT GGCCAAGCGG CTTCCATGCC
GGAATCAACA CGCAGATGGC GTCCAAGGTG CAAGTCGATT ACGCCAACAG TTACCACGCC
GATGCCTACG CCCTGCTCGG TGCGCGCCTG GGCTGGGACT CGCCGAAACA GGACTGGCAG
ACCTGGCTGG ACCTGCGCAA CCTGACCAAT AAACGCTATG CGGCGACGGT AACGCCGGGG
TACGACGATG CAGGGCAGGA CATTGCCCGG TCGACGCCAG GGGAAGGGTT TGGCGTATAT
GCCGGGGTTT CATACAGTTT CCGTTGA
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| Protein sequence | MRPVLPPSPC IGFVALFTVA QHVSAAPAVE LGEVLISDEA QSEMEDARER LQAVPGASNL
VDMRRVGQGR VASNQDVLAY QPGVFAQSAG NDGIKLSIRG SGINRAPGAH GSGVYTMFDG
LPLTGPGGTP YELFEPLWLS RAEVRRGANG FDQGALALGG AINYVTHTGY DAAPLQVRYE
AGSRGYQHRH VSSGQVLGNL DYYVALTDSE YDGYQTHSSG SAKGIAANAG YRFNPNLETR
FYLRYRETEN ELAGRLTKDQ IKHDPRAANA AYLARDDSRP QPGSTWAANK TTFYLEDDAR
VEAGLVYHDF PMDLREGPMR LKVAYTDVSG TLNYVRRDTL LGHQSNTTVG WRTTKHLPNS
GASQFARTTG DNFGARSRDF SYQGSDTVLH VGNDLELIPD LWLTTGLAMI YTRRESAVTY
PQSGGKVSQH DWDYAPRLGL RYDINPQLQV YGNLSRSVEP PHPWSLIWSS TVATQPIELQ
NQTATTLELG ARGDSALGRW DLAWYYSQVR HELLAVEIEA GLPAKEVNAS ATLHQGVEAG
LDSTLWEHAG TGKLSLRQAY TFSDFHYRDD DTFGDNRLPG IPVHYYQAEL RYDWPSGFHA
GINTQMASKV QVDYANSYHA DAYALLGARL GWDSPKQDWQ TWLDLRNLTN KRYAATVTPG
YDDAGQDIAR STPGEGFGVY AGVSYSFR
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