| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1407 |
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| Symbol | |
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| ID | 6110335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 1547042 |
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| End bp | 1548457 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641621181 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001748281 |
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| Protein GI | 170720593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.267158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTGC TGCGTTTGCT ACCTGGTGTT TTGATTTGCA TGACCGCCTG GCAGGCGATG
GCGGTGGAGT CCCAGGGCGA AATGCCAAAA GGTGTCGCCG CATCGACCTA CGCCCTGGAC
CTCGCAGGGC TCTACCGCGA GGCCCGCCTG GAAGACCCCC GCGTGCTGGC CGCCTACGCC
CGGGCGCGTT CGGCGGCTGA GCAGCAGCGT GAAGCCCTGG GTGGTTTGCT GCCGCAGGTG
TCGGCCAACG CTAACTCCAG CCGCGTGTTG CGCAAGAATG AACTGTCGCG CGACATCTAT
AACAACGAAA GTTACTCGCT CAGCCTGACC CAGTACCTGT ACAACAAGCC GGCCTGGGAG
CGTTACCAGA AGTCCAAGAG CGTCAAGGCC CAGAAAGGCC AGCAGGCCGA GGATACCTTG
GCCGAAGCGA CCGTCGACCT GGCCAAGCGC TACTTCGTTG CTTTGGCGGC AGACGATGAG
CTGGCGCTGG TGCAGGCCGA GCGCCGCGCC ACGCAAAAGA ACCTCGACCG CGTCAGCATG
ATGTTCGACC GGCAGATGGC CAAGATCACC GACAAGCTCG ACATGCAGGC GCGTGTCGAC
TCGCTGGCGG CGCAAGAGGT CGACGCACGC AACCAGGTGC AGGTCAGCCG TGAGGCACTG
GCCGAAATTG TCGGGCGGCC GATCAACGAA CCGCTGAGTC GGGTGCGTAA TGATGTGGCA
CTGCAGGCGC CGACGCGCCC GCTGCAAAGC TGGATTACCC AGGCGGTTGA AACCAACCCG
ATGCTCAAGG CTTCGCAAAG CGGCGCCGAG GCCGCCAATG CTGCGGTGCG CGAGGGCAAG
GGCGAGCATT ATCCTCAGCT GTCCCTGAGC TTGAGTGCAC AGCAGAGTGA CCAGGGTTAC
GACAATACCC AGGCGCCGCG CAGCGACAGT TATGTGGCCA CGTTCGGGGT GAAAATCCCG
ATCTATAGCG GCGGTTCCAC CTCTGCCCGG GTGCGTGGGC TGTATGACGA GCAACTGGCG
GCCGAAGAGC AGATGGAAGG TGTGCGCCGC CAAGTGGTTA AAGAAACCAC CACGGCGTAC
CTCACTGCCC AGTCCAGTGT CGAGAAGATC CGCGCCAACC GTAATGCCTT GTCCTCGGCG
CAGAAGTCCA GCGTTGCCGC GCAAAAGGCG TTCACCTACG GCGTGGTCAA CGCCGTGGAT
GTGCTGACGG CCGTACAGAA CGAGTTCAAG GCGCGGCGTG ATCTGTTGAG GTCGCAATAC
GATTTCATCA CTAACCTGTT CCTGCTCAAT CGCTGGGCAG GGGAGTTGAA CCAGGAAAGC
GTGGACAACG TCAACGTGTG GTTGAGCCCG GTGCCTGAGA CCAGCCTGCC TGGTGGCGAT
GTGGCGCGTG TTGATGGCGC GGCTGCGCTG AATTGA
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| Protein sequence | MIVLRLLPGV LICMTAWQAM AVESQGEMPK GVAASTYALD LAGLYREARL EDPRVLAAYA
RARSAAEQQR EALGGLLPQV SANANSSRVL RKNELSRDIY NNESYSLSLT QYLYNKPAWE
RYQKSKSVKA QKGQQAEDTL AEATVDLAKR YFVALAADDE LALVQAERRA TQKNLDRVSM
MFDRQMAKIT DKLDMQARVD SLAAQEVDAR NQVQVSREAL AEIVGRPINE PLSRVRNDVA
LQAPTRPLQS WITQAVETNP MLKASQSGAE AANAAVREGK GEHYPQLSLS LSAQQSDQGY
DNTQAPRSDS YVATFGVKIP IYSGGSTSAR VRGLYDEQLA AEEQMEGVRR QVVKETTTAY
LTAQSSVEKI RANRNALSSA QKSSVAAQKA FTYGVVNAVD VLTAVQNEFK ARRDLLRSQY
DFITNLFLLN RWAGELNQES VDNVNVWLSP VPETSLPGGD VARVDGAAAL N
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