Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5210 |
Symbol | |
ID | 5873024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5824878 |
End bp | 5825369 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641550346 |
Product | hypothetical protein |
Protein accession | YP_001671428 |
Protein GI | 167036197 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGA CCATAGGGGT ACTGCTGGCA GTACTGATCA GTCCATTGGC CCAGGCGGAG CTGATCGACG AAATCGCCGA CCGGGGCGAA CTGCGCATTG CCGTACAGGC TGATAATTCG CCGTACGCAT TCAAACAAGA CGACCACCTG ACGGGTTTCG ACATCGAATT TGGCCAGGAC CTGGCCAGGG AGCTGGACTT GCGCGCCGAG TTCGTCGAGG CCCCTGCAAC AGAAGTGCTG ACGGGTGTCG AGAGCGGCAA GTACGACATC GCGCTCACGC CATCGACCGA TGCGCTCAAG GGCGACGACG GCCCGCTCGA TGTAAGCCTT CCGATTGGCG AAAAAAAGCT GGTGATCCCG TTCCAGAAGG ACAATCCGGC GTTCGAAAGC GCGGTGAACA ATGCGTTGCA GCGCTTGAAA GAAAGCGGAC GCACTGCCGA GCTGGAGCAG AAGTGGTTCA AGGGCGTGCA GGAGACTGCG GCCGGGCAGT AA
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Protein sequence | MRSTIGVLLA VLISPLAQAE LIDEIADRGE LRIAVQADNS PYAFKQDDHL TGFDIEFGQD LARELDLRAE FVEAPATEVL TGVESGKYDI ALTPSTDALK GDDGPLDVSL PIGEKKLVIP FQKDNPAFES AVNNALQRLK ESGRTAELEQ KWFKGVQETA AGQ
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