Gene PputGB1_5210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5210 
Symbol 
ID5873024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5824878 
End bp5825369 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID641550346 
Producthypothetical protein 
Protein accessionYP_001671428 
Protein GI167036197 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGA CCATAGGGGT ACTGCTGGCA GTACTGATCA GTCCATTGGC CCAGGCGGAG 
CTGATCGACG AAATCGCCGA CCGGGGCGAA CTGCGCATTG CCGTACAGGC TGATAATTCG
CCGTACGCAT TCAAACAAGA CGACCACCTG ACGGGTTTCG ACATCGAATT TGGCCAGGAC
CTGGCCAGGG AGCTGGACTT GCGCGCCGAG TTCGTCGAGG CCCCTGCAAC AGAAGTGCTG
ACGGGTGTCG AGAGCGGCAA GTACGACATC GCGCTCACGC CATCGACCGA TGCGCTCAAG
GGCGACGACG GCCCGCTCGA TGTAAGCCTT CCGATTGGCG AAAAAAAGCT GGTGATCCCG
TTCCAGAAGG ACAATCCGGC GTTCGAAAGC GCGGTGAACA ATGCGTTGCA GCGCTTGAAA
GAAAGCGGAC GCACTGCCGA GCTGGAGCAG AAGTGGTTCA AGGGCGTGCA GGAGACTGCG
GCCGGGCAGT AA
 
Protein sequence
MRSTIGVLLA VLISPLAQAE LIDEIADRGE LRIAVQADNS PYAFKQDDHL TGFDIEFGQD 
LARELDLRAE FVEAPATEVL TGVESGKYDI ALTPSTDALK GDDGPLDVSL PIGEKKLVIP
FQKDNPAFES AVNNALQRLK ESGRTAELEQ KWFKGVQETA AGQ