Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4251 |
Symbol | |
ID | 5872055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4755538 |
End bp | 4756089 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641549382 |
Product | yecA family protein |
Protein accession | YP_001670475 |
Protein GI | 167035244 |
COG category | [R] General function prediction only |
COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
TIGRFAM ID | [TIGR02292] yecA family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.882611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCCCCG TACTCAGCGA AAAAGAACTC GACCGCCTCG AAGACCTGCT GATCACCTAT GGCAACGACT ACTCGGTACT CAACCTGGCC GAGCTCAATG GTTTCTTCAC CGCGCTGGCC AGTTCACCGG TAACCGTGAC CCCGGAACAT TGGTTGCCAG CCGCTGCCGG TGGCAAGGTG CCAAAGTTCA AGAAGCCGGC ACATGAAGAG GCTTATGTGG CGTTGATGCT GCGCTATGCC AGCCAAGTGG CGGAAGAGCT GAGCGATGAT GTCGACCAGT TCGAGCCGCT GTTCGAAGAA AGGGAAGACG AGCAGGGCAC TGTGATCGTG ATGGAGGAAT GGTGCTTCGG CTACATGCGC GGTACCCAGA TTGCCGGTTG GGGCGAGTTG CCGCAGGAGC AGGACCAACT GCTCAAGGCG ATTTCGCTGC ATGGGTTGGA GGACAATTTC GAACTGCTGG ACCAGATGAG CGAAGCGGAT ATCCAGGCCT GCGTACCGCA GGTTGTCGAG GCTTCGCGCG GGTTGTTCCG CTATTTCAAG AAACTGAACT GA
|
Protein sequence | MLPVLSEKEL DRLEDLLITY GNDYSVLNLA ELNGFFTALA SSPVTVTPEH WLPAAAGGKV PKFKKPAHEE AYVALMLRYA SQVAEELSDD VDQFEPLFEE REDEQGTVIV MEEWCFGYMR GTQIAGWGEL PQEQDQLLKA ISLHGLEDNF ELLDQMSEAD IQACVPQVVE ASRGLFRYFK KLN
|
| |