| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3725 |
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| Symbol | |
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| ID | 5871518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4141960 |
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| End bp | 4144890 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548847 |
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| Product | hypothetical protein |
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| Protein accession | YP_001669951 |
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| Protein GI | 167034720 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases
[COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC CACAGCACCC GCCCGCCTCC CCTGCCCTGG CCACGCTGAT CCAGCGTTCT
GGCCTGCCCA GCCCTTCGCT CAGCGAAACC CAGGCACACG CCGTGCTACA GAAGCACTAT
GGCATTGCCG GCAACCTGAC CGCGCTAGGC AGCCAGCAAG ACCTGAATTT CCGCGTGACC
ACGCCACAAG GCGGCTTTGT ACTCAAGGCT TGCCATGGCA GCTACGCGCA ACTGGAGCTG
GAGGCGCAGC ACGCCGCCCT GGCCTTCCTG CGCAATCAGG GCTTGCCGGT GCCGGCCGTA
CGCCCAGCCC TCGATGACCA GGGGTTGCTG ACACTGGACT TGGACGGGCA ACCACTGCGC
ATACGCCTGC TCGAGTACAT CGAAGGTCAG CCGCTGACCC GCCTCAAGCA CATGGCGCCA
CGTCTGATGG CTGAACTGGG CGGGCTTTGC GCGAAGCTGG ACAAGGCCTT GGTCGACTTC
GACCACCCCG GCCTTGCACG CACACTGCAA TGGGACCCGC AACATGCCCA GGCGCTGATC
CAGCACCTGT TGCCCGTGCT GCAGAATACC GAGCAACGCG CCCGCATCGA ACAGGCTACC
CAGCTGGCAG CCGAGCATCT GGCGCCCCTG GTCAATCAAC TGCCAAGCCA GGCCGTGCAC
CTGGACATCA CCGACGACAA CACCGTGTGG GCCCGCGATG GCGAACGCCA GTGGCAGTTG
CAAGGGGTGA TCGACTTCGG CGACCTGCTG CACACCTGGC GCATCGCCGA CCTGTCGGTG
ACTTGCGCGG CGCTGCTGCA CCACGCCGGA GGCGACCCGC TGCGGATCCT GCCGGCAATC
AGTGCCTACC AGGCGCTCAA CCCACTGACC GAAGCCGAAG TACGTGCCCT CTGGCCACTG
GTGCTCAATC GCGCCGCAGT GCTGGTGCTG AGCAGCGCGC AACAACTTGC CGTGGACCCG
GGCAACCAAT ACACCCGCGA CAACGTCGCC CATGAATGGG AAATCTTCGA CACCGCCACC
GCTGTGCCTT TCGCGCTGAT GGAAGCCGCT ATCCTGCAGG CTGCGGGCCT GCAACCCAAG
GCGCCGGACT TGAGCGGTTG CGCCCCCTTG CTCCCCGAAC TGGCCGGGCA GGCTGTAACA
CGGGTAGACC TGGGGGTGCT CAGCACATAT TGCGAGGCCG GAAACTGGGA GCAACCCGGT
TTCGACCAGC ACCTGCTGAC GTTGCAGGCC GCTCCGGCCT GCAGCCTGCA CGGGCAATAT
CGCCTTTCGC AAACCCATAT TGATCGCCCT GAAGAGCCCG CCACCTGCGC CCTCGGCGTT
GAGCTGCACG TGGCCAACGG CTCCCAGGTG CAGGCGCCGG AAACCGGCAT CTGGCAGCGC
CATGGCGACG GCCGTGGCTG CCTGCGCACC ACGCACTGGG CTTTGTGGCT GCAGGGCCTG
GAGGACGCTC CGGCAGACGG CCAGGCCGTA GAAAAAGGCC AGTCCCTGGG CCGCAGTTGT
GGCTTCCTCA GCGTGCAGTT GTGCCTGGAC AACGGCGTCC AGCCGTCGTT CTTCGCCACG
CCGTCCCAAG CTGCTGCCTG GCTGGCCCTG TGCCCGTCGC CAGCCGCGCT GCTAGGCTTC
GATTGCGATG CCGATCCGCT GCCCGACCCA CAAGCACTAT TGGCCCGCCG CGATGCCAGC
TTCGCCCGCT CGCAGAAGCA CTACTACGCG CAACCTCCAC ACATCGAGCG CGGCTGGCGC
AACTACTTGA TCGACATGCA GGGCCGCTCG TACCTGGACA TGCTCAACAA TGTCGCGGTA
CTGGGCCACG GCCACCCGCG CATGGCCGCC GAGTCGGCGC GGCAGTGGTC GCTGCTGAAC
ACCAACTCAC GCTTCCACTA CGCGGCGATC ACCGAATTCT CCGAACGCCT GCTGGACCTG
GCCCCCGACG GTTTCGACAG GGTCTTCATG GTCAACAGCG GCACCGAAGC CAACGACCTG
GCGATTCGCC TGGCCTGGGC CTACAGCGGC GGGCGTGACC TGCTCAGCGT ACTGGAGGCC
TACCACGGCT GGTCGGTGGC CACCGATGCC ATTTCCACCT CCATCGCCGA CAACCCGCAA
GCCCTGGAAA CCCGCCCGGA CTGGGTACAC CCGGTCGAGG CGCCGAACAC GTTCCGGGGG
CGTTTCCGCG GTGCCGACAG CGCCGCCGAC TACCTGCAGG ACGTCGACGC CAAGCTGGCT
GCCCTGGACG CCCGAGGCCG CCAGTTGGCG GGTATCATCT GCGAACCGGT GTACGGCAAT
GCCGGCGGCA TCTCGTTGCC CGCAGGCTAC CTGCGCGACG CCTATGCCAA GGTCCGCGCC
CGAGGTGGCG TGTGCATCGC CGACGAAGTG CAGGTGGGCT ATGGCCGCCT GGGCGAGTAC
TTCTGGGGGT TCGAAGAACA AGGCGTGGTG CCCGACATCA TTACCATGGC CAAGGGCATG
GGCAACGGCC AGCCGCTGGG CGTGGTCATC ACCCGCCGTG AAATCGCCGA GGCGCTGGAG
GCCGAGGGTT ACTTCTTCTC CTCGGCCGGT GGCAGCCCGG TCAGCTGCCG CATCGGCATG
GCGGTACTGG ACGTGATGCA GGAGGAAGGC CTGTGGGACA ACGCCCGCGA CACCGGGCGC
TACTTCAAGG CCCGTCTGCA GGCCCTGGTC GACAAGTACC CGCTGGCCGG CGCGGCACAT
GGCTCGGGTT TTTACCTGGG ACTGGAGCTG GTGCGCGACC GCGCAACCCT GGAACCGGCC
ACCGAAGAAA CCATGACGCT GTGCAATCGG CTGCGTGACC TTGGCATCTT CATGCAACCG
ACCGGCGACT ACCTGAACAT TCTCAAGATC AAGCCACCGA TGTGCACCAG CCGAGCGAGT
GTGGACTACT TTGTCGACTG CATCGACAGG GTGCTGGGCG AAGGGCTGTA A
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| Protein sequence | MSSPQHPPAS PALATLIQRS GLPSPSLSET QAHAVLQKHY GIAGNLTALG SQQDLNFRVT
TPQGGFVLKA CHGSYAQLEL EAQHAALAFL RNQGLPVPAV RPALDDQGLL TLDLDGQPLR
IRLLEYIEGQ PLTRLKHMAP RLMAELGGLC AKLDKALVDF DHPGLARTLQ WDPQHAQALI
QHLLPVLQNT EQRARIEQAT QLAAEHLAPL VNQLPSQAVH LDITDDNTVW ARDGERQWQL
QGVIDFGDLL HTWRIADLSV TCAALLHHAG GDPLRILPAI SAYQALNPLT EAEVRALWPL
VLNRAAVLVL SSAQQLAVDP GNQYTRDNVA HEWEIFDTAT AVPFALMEAA ILQAAGLQPK
APDLSGCAPL LPELAGQAVT RVDLGVLSTY CEAGNWEQPG FDQHLLTLQA APACSLHGQY
RLSQTHIDRP EEPATCALGV ELHVANGSQV QAPETGIWQR HGDGRGCLRT THWALWLQGL
EDAPADGQAV EKGQSLGRSC GFLSVQLCLD NGVQPSFFAT PSQAAAWLAL CPSPAALLGF
DCDADPLPDP QALLARRDAS FARSQKHYYA QPPHIERGWR NYLIDMQGRS YLDMLNNVAV
LGHGHPRMAA ESARQWSLLN TNSRFHYAAI TEFSERLLDL APDGFDRVFM VNSGTEANDL
AIRLAWAYSG GRDLLSVLEA YHGWSVATDA ISTSIADNPQ ALETRPDWVH PVEAPNTFRG
RFRGADSAAD YLQDVDAKLA ALDARGRQLA GIICEPVYGN AGGISLPAGY LRDAYAKVRA
RGGVCIADEV QVGYGRLGEY FWGFEEQGVV PDIITMAKGM GNGQPLGVVI TRREIAEALE
AEGYFFSSAG GSPVSCRIGM AVLDVMQEEG LWDNARDTGR YFKARLQALV DKYPLAGAAH
GSGFYLGLEL VRDRATLEPA TEETMTLCNR LRDLGIFMQP TGDYLNILKI KPPMCTSRAS
VDYFVDCIDR VLGEGL
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