| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3317 |
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| Symbol | |
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| ID | 5871102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3723191 |
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| End bp | 3725641 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548433 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001669545 |
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| Protein GI | 167034314 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC GCTTCAACCC CAGGCCTTTC ACTGCGCCAG GCCTGCGCAC CTGCCTGATG
CTGGCTGCCC TGCTCGGTGG GCCCGGCGCC GCCTGTGCCA GCCAAGCCCA TGATTACCAC
CTGCCGCAGG GTGACTTAGG CGAAACACTG ACTCAGTTCG CTGCGCAGTC CGGCATCGTG
CTGTCGTTCG ACACGCACTT GACGCGCGGT AAACGTTCGC CGGCACTCGA CGGGCGCTAT
GGCGTAGAGC AGGCCTTGCG AATGCTGCTG GGCGGTACCG GGTTGCAAGC CATACAGGAA
AGTGACGGGC GCTATTCGCT GCTGTTGAAC ACCGGCGAGG GCGATGTGGT GGAGTTGGCA
CCCAGCCGCG TCGATGCCCT GGGGCTGGGT AACGTCACCG AGGGTACCGG TGCGTACACC
ACCGGTGGTT CTACCACTGC AACCAAGCTG CCACTGACCC TGCGTGAGAC ACCGCAGTCG
GTCAGCGTGA TCACTCGCCA GGTCATGGAC GACCACGGCT CGCAAGACAT CGGCGACGTG
CTGCGCAACA CGCCTGGGGT GTCAGTCCAG GCTTATGACA GCGAACGCAT GGAGTACTCC
GCACGCGGCT TTGCCATCAC CAATTACCAG TACGATGGCA TCAACACCAT CTATGACGGG
GTCTACGACG AGGGCGTAAC CCATGTCGAC ATGGCCGCCT ATGACCGTAT CGAAGTCATC
AAGGGCGCGA CCGGCCTGAT GACCGGCTCT GGCGACCCAT CTGCCACGGT CAACCTGGTG
CGCAAGAAGC CCACTCACCA CTTCAAGGCG TCGATCACCG CCAGCGCCGG CTCCTGGGAC
AACTACCGTA CCGAAGGTGA CATTTCCGGT TCGCTCAACG ACAGCGGTAG CGTGCGCGGC
CGCCTGGTGG GTGCCTACCA GGACCGCAAG TCGTACCTGG ACCACTACAA GCAGAAAAAG
GACGTCTACT ACGGCATTGT CGAAGCCGAC CTGACACCCG ACACGCTGCT GACATTCGGC
ATCGACAACC AGGCCACTAC CCCGCGCGGG TCGTCCTGGA CCGGCAACCC GACGTACTTC
TCCGACGGCA GCCGCACCGA CTTTTCGCGC GCACACAACC CGGCAGCCGA CTGGAGCCGT
CGCGACTTCC AGTCCACCAC CTACTTCAGC TCGCTGGAGC AGGCCCTGGT CAATGACTGG
AAGGTCAAAT TCAGCCTCAA CCACATGATC AGCGATCACG ACACACGCCT GGCTTCTGCC
AGCGGCGGCA ACCCGGACCC GGTCACCGGC GAAGGGATGT TCCTGTATTG GGGGCGCTGG
GAAGGCCACC GCGTGCAAAA CACCGCAGAC TTGAATGTAT CCGGGCCGTT CACCCTGTTC
GGCCGCGAGC ATGACCTGGT GGCAGGCTTC ATGACCTCGC ATTCGCGGCA GACCGGTGAT
ACCTACGACG GCAGCGCATT CGAGAAGGTG CCCGGTTCCA TCTTCGACTG GAACGGCAAA
CTGCCCGAGC AGCACTTCCC GAAAAACGGC GACTACACCA CCACGCAAAG CCAGAACGGC
GCCTATGTGG CCACCCGCCT GCGGCCGACC GACAAGCTTT CGGTCATCCT CGGCACCCGC
GTCAGCACCT TCAAGTACAA CGATGATGAA GACTATTACC CAACGTCTTC GCTGAGCGAC
ACCCACGCGA GCTACAAGGA ACACGGTGTG GTCACCCCCT ACGCGGGCGT GGTCTATGAC
CTGGACGACA CCTACTCGGC CTATGCCAGC TACACCTCCA TTTACCAGCC ACAAGTGTAC
AAGGACATCA ACGGCGCGAC CTTGGCACCG GTGGAAGGCG ATGGTTATGA AGCAGGTTTC
AAGGCCGCCT GGTTCGATGG CCGGCTGAAC GGCACCCTGG CGTTCTTCCG CATCGAGCAA
GACAACGTCG CCTCCAACGT CGGCACCAAC CCGGTAACCA ACGAAGGCAT CTACAAAGCT
ATCGACGGTG CAACCACCAA AGGTGTCGAA CTGGAACTGG CCGGCGAACT GGCGCCCGGC
TGGAACATCA CCGCCGGCTA TACCTATGCC CGTACCCGCG ATGCCGACGA CCAGCGGATA
TTCGGTTTCC CGTTGGCAAC CACCAAGCCT GAACACGTAG TGCGGCTATT CAATACCTAC
CGCCTGCCTG GTGTACTCGA TCCGGTGACC GTAGGCGGCG GGCTGAGGTG GCAAAGCGGC
TTCTATGGCA ACATCTACAG CCCGGTCGCC AATGACTACA CCCGCATCAA GCAAGGCGGC
TACACCCTGG TCGACTTGAT GGCCCGCTAC CAGTACAACG AGCACCTGAG TTTTACGGTC
AACGCCAACA ACGTGTTCGA CAAGGTCTAC CTGACCGGGC TGGGCAACTT CGATACGACC
TACTATGGCG AACCACGCAA CCTGATGGTC ACCACCCGCT GGGATTTCTA A
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| Protein sequence | MTRRFNPRPF TAPGLRTCLM LAALLGGPGA ACASQAHDYH LPQGDLGETL TQFAAQSGIV
LSFDTHLTRG KRSPALDGRY GVEQALRMLL GGTGLQAIQE SDGRYSLLLN TGEGDVVELA
PSRVDALGLG NVTEGTGAYT TGGSTTATKL PLTLRETPQS VSVITRQVMD DHGSQDIGDV
LRNTPGVSVQ AYDSERMEYS ARGFAITNYQ YDGINTIYDG VYDEGVTHVD MAAYDRIEVI
KGATGLMTGS GDPSATVNLV RKKPTHHFKA SITASAGSWD NYRTEGDISG SLNDSGSVRG
RLVGAYQDRK SYLDHYKQKK DVYYGIVEAD LTPDTLLTFG IDNQATTPRG SSWTGNPTYF
SDGSRTDFSR AHNPAADWSR RDFQSTTYFS SLEQALVNDW KVKFSLNHMI SDHDTRLASA
SGGNPDPVTG EGMFLYWGRW EGHRVQNTAD LNVSGPFTLF GREHDLVAGF MTSHSRQTGD
TYDGSAFEKV PGSIFDWNGK LPEQHFPKNG DYTTTQSQNG AYVATRLRPT DKLSVILGTR
VSTFKYNDDE DYYPTSSLSD THASYKEHGV VTPYAGVVYD LDDTYSAYAS YTSIYQPQVY
KDINGATLAP VEGDGYEAGF KAAWFDGRLN GTLAFFRIEQ DNVASNVGTN PVTNEGIYKA
IDGATTKGVE LELAGELAPG WNITAGYTYA RTRDADDQRI FGFPLATTKP EHVVRLFNTY
RLPGVLDPVT VGGGLRWQSG FYGNIYSPVA NDYTRIKQGG YTLVDLMARY QYNEHLSFTV
NANNVFDKVY LTGLGNFDTT YYGEPRNLMV TTRWDF
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