| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3034 |
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| Symbol | |
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| ID | 5870819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3382017 |
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| End bp | 3382637 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641548150 |
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| Product | integrase family protein |
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| Protein accession | YP_001669262 |
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| Protein GI | 167034031 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.155662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA TTACGACCGG CAGCCATCAA CCTTGGAACA AAGGAAAATT GGTCGGGCAG
AAAGCCCCGC TCCGACTCAA AGATATCTGG GCCATTCGGG TAAGGCTCCA AATCGCGGAG
GAAACTCGTG ATTTAGCTCT CTTCGATCTG GCCATCGACA GCAAGCTACG AGCCTGCGAT
TTGACCAAGC TTCGTGTACG CGACGTTGCG CATGGGGAGC ACGTGTCATC GCGAGCAATA
GTGATGCAGC AGAAAACCCA GCGCCCCGTG CAGTTTGAGA TTACTGAGCA AACGCGGGTG
GCTCTGGAGG CCTGGATACA TCAAGCCCAT CTCCATAGCG AGGATTGCCT TTTTCCAAGC
CGGCTACACG CCTCACTGCA CCTCTCTACC CGGCAATACG CCCGAATCGT CAAAGCTTGG
GTAAAAGCTA TTGGCCTTGA TCCAGCCATG TATGGCACCC ACACGATGAG ACGTACGAAG
GCATCGCTGA TCTATCGCAG GACGAAGAAT CTGAGAGCAG TTCAGCTCCT GCTAGGCCAT
ACGAAGCTTG AGAGCACGGT GCGATACCTG GGCATTGAGG TCGATGACGC ATTGGAGATG
GCGGAGCAGA CGGAGGTCTG A
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| Protein sequence | MNTITTGSHQ PWNKGKLVGQ KAPLRLKDIW AIRVRLQIAE ETRDLALFDL AIDSKLRACD
LTKLRVRDVA HGEHVSSRAI VMQQKTQRPV QFEITEQTRV ALEAWIHQAH LHSEDCLFPS
RLHASLHLST RQYARIVKAW VKAIGLDPAM YGTHTMRRTK ASLIYRRTKN LRAVQLLLGH
TKLESTVRYL GIEVDDALEM AEQTEV
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