Gene PputGB1_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3007 
Symbol 
ID5870792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3352467 
End bp3352931 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content54% 
IMG OID641548123 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001669235 
Protein GI167034004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.442011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.933539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTA TCGACTTGCT GATTCAAGAC CACAAGCTGG TGAAGAAGCT ACTCGAAGAA 
TTGTCGACCA CCACCGAGCG AGCGGTGAAG AAACGGGCCG AGTTACTCCA CAGGATCGAG
CAGGAACTTC AGATTCACAC CGCGCTCGAA GAAGAGATTC TTTATCCGGC CATCAAGGAA
GCGGGAGGCA AGGAAGAAGC AAAGATGTAC TACGAGGCCA AGGAGGAGCA CCGGACTGTC
GATTCGCTCG TCCTACCCGA CCTGCTGCAT ACCGAAACTG GCACCGTCGA ATTCGCCGGG
CGGGTCAAGG TCATGAAAGA GTTGTTGGAG CATCACATCG AGGAAGAAGA AGGCGAGCTG
TTCCCCACGG CGAAGAAGCT GCTCAGTAAG GACATCCTTG AGGAGCTGGG GCGAACCATG
GAAATGCAGA AAAAGATGCT CAAGGGCGAG AAGCGAGCGG CTTAG
 
Protein sequence
MNAIDLLIQD HKLVKKLLEE LSTTTERAVK KRAELLHRIE QELQIHTALE EEILYPAIKE 
AGGKEEAKMY YEAKEEHRTV DSLVLPDLLH TETGTVEFAG RVKVMKELLE HHIEEEEGEL
FPTAKKLLSK DILEELGRTM EMQKKMLKGE KRAA