| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2460 |
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| Symbol | |
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| ID | 5870249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2754235 |
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| End bp | 2754714 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641547583 |
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| Product | secretion type II protein |
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| Protein accession | YP_001668695 |
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| Protein GI | 167033464 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.839329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC GGCGCCGTAT GCACGGCTTC AGCCTGATCG AGGTGGTGCT GACCCTGGCA
CTGCTCGGGC TGCTGGCCAG CATGGCCGCG CCGCTGACCG AAACCGTGGT GCGCCGTGGC
AAGGAGCAGC AACTGCGCGA GGCGCTGTAC CAGATTCGCG ATGCCATTGA CGCCTACAAG
CGGGCCTTCG ACGCCGGCTA CATCGAGAAA CGCCTGGATG CCAGCGGCTA CCCGCCGAAC
TTGCAGGTAC TGGTGGATGG CGTGCGCGAT GTGCGCAGTG CCAAGGGCGC CAAGTTCTAC
TTCCTGCGGC GCATCCCGCA CGACCCGCTG GTGGCGGCCA AGGATGAAGA CGAAGGCGGC
TGGGGCCTGC GCGCCTACGA CAGCAGCCCC GACAACCCGC GCGAAGGCGA AGACGTGTTC
GACGTGTACT CCAGGGCTCG AGGCAAAGGC CTCAACAGCA TCCCTTACGG GCAATGGTGA
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| Protein sequence | MKTRRRMHGF SLIEVVLTLA LLGLLASMAA PLTETVVRRG KEQQLREALY QIRDAIDAYK
RAFDAGYIEK RLDASGYPPN LQVLVDGVRD VRSAKGAKFY FLRRIPHDPL VAAKDEDEGG
WGLRAYDSSP DNPREGEDVF DVYSRARGKG LNSIPYGQW
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