Gene PputGB1_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2218 
Symbol 
ID5870007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2475299 
End bp2475697 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content67% 
IMG OID641547343 
Productcytochrome c class I 
Protein accessionYP_001668455 
Protein GI167033224 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.925658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC TCGCCCCCCA CAAGTTCGCA ATCCCGTTCC TGCTCGCCAC TCTGGTCAGC 
CCCCTTGCCC TGGCCGAAGA CTGCGCCGCG CCACAACGCC AGCAAGGCGA ACAGGTGTTT
GCCCGTGACT GCGCAGCCTG CCATTCGGCA CAAAAGGGCG GCCCGGCAAT GATGGGCCCC
AACCTGCACG ACGTGGTAGG CCGTACACCT GGCAGCGTGC CAGGCGCCAA CTACTCGCAG
GCCATGAAGA GCCGCCAGGC CAGCTGGACG GCGCAAGCCA TCGGCGCCTT CATCGAGCAA
CCACAGGCCG CAGTCCCCGG CACCTACATG CCCTACGCCG GGCTGCCGGA TGCTGGCGAA
CGCCAGGCGG TGACCTGCTT CCTCGCCGGG CTCAAATAA
 
Protein sequence
MPTLAPHKFA IPFLLATLVS PLALAEDCAA PQRQQGEQVF ARDCAACHSA QKGGPAMMGP 
NLHDVVGRTP GSVPGANYSQ AMKSRQASWT AQAIGAFIEQ PQAAVPGTYM PYAGLPDAGE
RQAVTCFLAG LK