Gene PputGB1_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_2180 
Symbol 
ID5869969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp2431318 
End bp2432112 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID641547305 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001668417 
Protein GI167033186 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.470778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CGTCGTCGTC ACTGTTGAGC AACGTCGAAG CCGGCGTTGC CTGGATCACC 
CTCAACCGCC CCGAGCAGCG CAACGCGCTG GATATCCCAA CCCTCAAGCA ACTGCATGCC
TTGCTCGACA GCCATAACGG CGACCCGGCG GTACGCGTGG TGGTACTCAC CGGCAGCGGG
CGCAGTTTCT GCGCCGGCGC CGATCTGGCC GAATGGGCTG CCGCCGAAGC CGCAGGCACC
CTGGAAAGCT ACGGCTGGAC CGAAACCGCC CATGCTCTGA TGTTGCGCCT GCACAGCCTC
GCCAAACCCA CCATCGCCGC CATCAACGGC ACCGCCGTGG GCGGTGGCAT GGACCTCAGC
CTGTGCTGCG ACCTGCGCAT CGCCGCCGCC TCGGCGCGTT TCAAGGCCGG CTACACCAGC
ATGGGCTACA GCCCCGATGC CGGCGCCAGC TGGCACCTGC CACGGCTGAT CGGCAGCGAG
CAGGCCAAGC GTTTGTTGTT CCTCGATGAA CTGTGGGGCG CCGAGCGCGC CCTGGCGGCT
GGGCTGGTCA GTGAAGTCTG TGCCGACGAG CAACTGCCCG CCGTGGCCGC CGAGTTGGCC
GGGCGCCTGG CCTGCGGCCC GACCTTCGCC TTTGCGCAGA CCAAGCAACT GATGCGTGAC
GGCGCCCGGC GCACCCTGGC CGAGCAGCTG GAAGCCGAGC GCCACGCCGG CCTGTTGTGC
GGCCGCAGCC AGGATGGCGT CGAGGCGCTG CAAGCCTCGG TTGAACGCCG CGCCCCCCGT
TTCATCGGCC AGTAA
 
Protein sequence
MTTPSSSLLS NVEAGVAWIT LNRPEQRNAL DIPTLKQLHA LLDSHNGDPA VRVVVLTGSG 
RSFCAGADLA EWAAAEAAGT LESYGWTETA HALMLRLHSL AKPTIAAING TAVGGGMDLS
LCCDLRIAAA SARFKAGYTS MGYSPDAGAS WHLPRLIGSE QAKRLLFLDE LWGAERALAA
GLVSEVCADE QLPAVAAELA GRLACGPTFA FAQTKQLMRD GARRTLAEQL EAERHAGLLC
GRSQDGVEAL QASVERRAPR FIGQ