| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2139 |
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| Symbol | |
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| ID | 5869928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2384805 |
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| End bp | 2386106 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641547264 |
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| Product | outer membrane porin |
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| Protein accession | YP_001668376 |
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| Protein GI | 167033145 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0667606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000330448 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCTCTC GCATGTTTGC CCCTTTCCCT CACGCCCCTG GGCGTCGTGT TGCCGGCCTG
TTCCTGTTGT GTGCCGGCGT CAACGCCCAG GCCGCCGGTT TTCTTGAAGA CAGTAGTGCC
AAGGTCGAAG CACGCAATGT CTATTTCAAC CGGGATTTCC GGGACGGCCA CAGCAGTTCC
AGCCAGGGCG CGTCCAAGCG CGAAGAATGG GCACAAGGCT TCATCCTCAA TGTGCAGTCG
GGTTATACGC AAGGGCCGGT AGGCTTTGGT GTTGATGCGC TGGGCATGTT CGGCTTCAAA
CTGGATTCCA GCCCTGCCGA CAGTAACAGT GGTTTGCTGC CGTCTTCCGG GCATGATCCG
CGCGGCTCTG CCGACCAGTA CGCGAAGATG GGCCTGGCGG CCAAGGTCAA GGTTTCCAAC
ACCGTGCTCA AGTACGGTTC GATGATGCCG GATGTGCCGT TGCTCAAGTA CAACGATGGC
CGCCTGCTGC CGACCATGTT CCACGGCGCC ATGCTCACCT CCGAAGAATT GCGCAACCTG
AAGTTCACCG TGGCGCGGCT GGACAAATAT ACCGCTCGGG ACTCTACCGA CCGCCAGGAC
ATTCGCGTGC ACTGCAAGAA CAAGCGCTAT GCCTGCGATA CCGAAGCCGA CCACTTCGAC
CTGGCCGGTG TCGATTACCG TTTCAACGAG CGGATCAGCG CCCAGTACCA GGTCGCCAAG
CTGGAAAACA TCTATCGCCA GCACTTCCTC GGCCTGGTGG CCAGCCAGCC GCTGGCAGTG
GGTAGCCTGT CTGCCGACCT GCGCCTGATC AAGAGCGATG ACATCGGCAA TGCCCGTGCC
GGCGCAATCG ACCACCGCGC GTTCAGCGGC ATGCTTGGCT ACAGCCTGGG TGGCCACAAG
GTGAGTGCCG GCTGGCAGCG CATGTATGGC GACAGCGCCA TGCCGTATCT GGATGGCAGC
AACCCATACC TGGTCAACTA TGCCCAGGTC AACGACTTCG CCGCCGCCCA GGAGCGTTCC
TGGCAAGTGC GCTATGACTA CGACTTCAAG GCACTGGGGG TGCCTGGCCT GACCTTCTTC
ACCCGTTATA TCAATGGCGA CTCCATCAAG GTGCCGGGCA GCAGTGCCGA AGGTAAGGAA
TGGGAACGCG ACACTGAGTT CAAGTACCAA GTGCAAAGTG GCACTTTCAA GGATGTCAGC
GTGCGCCTGC GTAATTCCAC TTACCGCAGC AACTATGAAA AGTGGGCACG TGACATGGAT
GAAACACGGG TCATTGTCAG CTACAACTTC TCGATCTTCT AA
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| Protein sequence | MFSRMFAPFP HAPGRRVAGL FLLCAGVNAQ AAGFLEDSSA KVEARNVYFN RDFRDGHSSS
SQGASKREEW AQGFILNVQS GYTQGPVGFG VDALGMFGFK LDSSPADSNS GLLPSSGHDP
RGSADQYAKM GLAAKVKVSN TVLKYGSMMP DVPLLKYNDG RLLPTMFHGA MLTSEELRNL
KFTVARLDKY TARDSTDRQD IRVHCKNKRY ACDTEADHFD LAGVDYRFNE RISAQYQVAK
LENIYRQHFL GLVASQPLAV GSLSADLRLI KSDDIGNARA GAIDHRAFSG MLGYSLGGHK
VSAGWQRMYG DSAMPYLDGS NPYLVNYAQV NDFAAAQERS WQVRYDYDFK ALGVPGLTFF
TRYINGDSIK VPGSSAEGKE WERDTEFKYQ VQSGTFKDVS VRLRNSTYRS NYEKWARDMD
ETRVIVSYNF SIF
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