| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1585 |
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| Symbol | |
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| ID | 5869365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1786345 |
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| End bp | 1788831 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546703 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001667826 |
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| Protein GI | 167032595 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.927871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.219293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCATC TGTACCCCAC CCCTGCAACC AAACTGACCC AGGCCGTGCG CCTGGTGCTG
TTCGGCATGT CCCTTGCCAG CGCGCCGTGC CTGCTGCTGA TGCCTGCCCA GGCCATGGCT
CAAAGCCAGA CCGCCTACCA TGTCCCCGCT GGCCCTTTGG GCAATGCCAT AACCCAGTTT
GGCGTGCAGG CGGGTGTGAC CATTTCGTTC GACACCGAGC AGACCCGCAA CCTGAGCAGC
GCAGGCCTGG AAGGCAGCTA CAGCGTCGAG GAAGGGCTGG TGCGGTTACT GAGCAATAGC
GGCTTGCAGG CGCAGCGCCA GGGCAATGGC GGTTATGTGC TGGTGCCGGC AGACTACGGC
ACGGCCATGG AGCTGGGGCC GCTGAACATC GACTCCAATC GGCTGGATGC GACCAGCGAG
GGCACCCAGT CATACACCGC CCGCGCAGTG ACCATCGGCA AGGGCGTCCA TACGCTGAAA
GAAACCCCGC AGGCGGTCAC CGTGATGACC CGCAAGATGC TTGACGACCA GAACCTGAAC
ACCCTCGAAC AGGTACTGGA CAAGACCCCT GGCATCACCG TGTATGACTC GCCCATGGGC
GGCAAATACT TCTACTCCCG TGGTTTCAAC CTGGACGGCC AGTACCAGTA CGACGGCGTG
CCGCTGGACG TGGGTGGCAA CTACGTGCAG GCCAACAGCT TTTCCAGCGA CATGGCGTTC
TACGACCGCG TCGAAATCCT CAAAGGCGCG GCCGGGATGA TGAAGGGCTC CGGCTCCTCC
GCTGGTGGTG TCAACTTCGT GCGCAAGCGC GGCCAGGACA AGGCCGCGAC CACTGTCACC
CTGTCCGCCG GCAGCTGGGA CAACTATCGC GGCCAAGTCG ACGTAGGCGG CCCGCTGAAC
GAGTCGGGCA GCGTGCGGGG CCGCGCGGTG GCAGCCCTGC AGGACCGCCA GTATTTCTAT
GACACGGCCA AGCGCCAGGA CCAGATACTG TATGGCGCCA TCGACTGGGA CGTCAGCGCC
GACACCACCC TGGGCTTCGG CCTGGCCTAC GAGGACGTCG ATGCCACACC GTGCTATGCC
GGCGTGCCAC GCTACGCCGA TGGCAGTGAC CTGAAGCTGT CGCGTTCCAC CTGCCTGGGG
GCCAGTTGGA ACGACCTGCA AAGCCAGCGT ATTACCGGCT TTGCCGACTT CAAGCACCGC
TTCAACGATG ACTGGACACT GAACTTCGCC TCGGTCTACA CCCACAACGA CCAGGACATC
GAATACGCCT ACTCCGAAGG CACGGTGCCG GTCGGCGCCA ACACTGCCAG CATGGCCGTC
CGCGCCGGTC GTTTCGACTA CGACCAGGAC GACTACGGCT TCGATAGCTA TATTGATGGC
AAGTTCGAGG CGTTCGGCCT GCAGCACGAG CTGATCATCG GCGCCAACGC CAGCCGGCAG
AAAACCCATG ATTACTTCGC GCTGATTCTA CTGGACGGCA AGCAGAACCC GTTCAACCCC
TCCCCGAACT TCCCTCGCCC GTCCAAGGAC GATTACCTGG TCAACCCGAC CCGTGGTGGC
AGCGTACCAA CCGATTCCAC CACCACCCAA TACGGCACCT ACGCCAACCT GCGCTTGAAG
CTGGCAGAGC CGCTTACCCT GGTACTGGGC GCGCGGGTCA GCTGGTACCG CAACAAGAGC
GACTCCTACA CCGAGTTCTA CGATTACTGG GTGAACAACC GCAGTGAGGA AAACGGCCAG
GTCACGCCGT TCGCCGCCGT GCTTTACGAC CTGAACGACC AGTGGACCGC CTACGCCAGC
TACGCCGACA TCTTCCAGCC GCAGAGCGAC AAGGTGAACG CCGAGCGGCA GCCACTTCAG
CCCAAGACCG GTGCCAACTA CGAGATTGGC ATCAAGGGCG AGCTGCTTGG CGGCGCGCTG
AATACCTCGT TCAACCTGTT CCGCACCGTC GAGAACCACC GCGCGGAAAG CGACTACATC
GAGACCTGCC CGTCAGGCGA CGGGTATTGC TACACCGACA GCGGCAAGGT GCGCGCGCAG
GGTTTCGAAG CCGAGATCAG CGGCTCGCCG ATCGAGCGCC TGCAACTGTT GGCGGGCTAC
ACCTACACCC AGACCAAATA CCTGAAGACC ATCGAAGACA GCGACCCCAC CGAGCTGACG
TTCACCTCCA GCTTCATTCC ACGGCACATG TTCAAAGTGT GGGGTGACTA CCAGCTGGGC
GGTGCCCTGG AACGCTGGAC CCTCGGTGCC GGTCTGAACA GCCAGAGCGA GAACTTCCGC
ACCACCCGCA ACACCCGCGT CGAGCAGGCG GGCTACACCG TGTGGAACGG CCGCGTGCAG
TATCGCCTGG ACCAGAACTG GACCGTCGCC CTCAACGGCA ACAACCTGTT CGACAAGAAG
TACTACGCCA CCATCGGTGC GCCGGGCTGG GGTAACTTCT ATGGTGAGCC GCGTAACTTC
ATGGTGACCT TGCAGGGGGC GTTCTAA
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| Protein sequence | MPHLYPTPAT KLTQAVRLVL FGMSLASAPC LLLMPAQAMA QSQTAYHVPA GPLGNAITQF
GVQAGVTISF DTEQTRNLSS AGLEGSYSVE EGLVRLLSNS GLQAQRQGNG GYVLVPADYG
TAMELGPLNI DSNRLDATSE GTQSYTARAV TIGKGVHTLK ETPQAVTVMT RKMLDDQNLN
TLEQVLDKTP GITVYDSPMG GKYFYSRGFN LDGQYQYDGV PLDVGGNYVQ ANSFSSDMAF
YDRVEILKGA AGMMKGSGSS AGGVNFVRKR GQDKAATTVT LSAGSWDNYR GQVDVGGPLN
ESGSVRGRAV AALQDRQYFY DTAKRQDQIL YGAIDWDVSA DTTLGFGLAY EDVDATPCYA
GVPRYADGSD LKLSRSTCLG ASWNDLQSQR ITGFADFKHR FNDDWTLNFA SVYTHNDQDI
EYAYSEGTVP VGANTASMAV RAGRFDYDQD DYGFDSYIDG KFEAFGLQHE LIIGANASRQ
KTHDYFALIL LDGKQNPFNP SPNFPRPSKD DYLVNPTRGG SVPTDSTTTQ YGTYANLRLK
LAEPLTLVLG ARVSWYRNKS DSYTEFYDYW VNNRSEENGQ VTPFAAVLYD LNDQWTAYAS
YADIFQPQSD KVNAERQPLQ PKTGANYEIG IKGELLGGAL NTSFNLFRTV ENHRAESDYI
ETCPSGDGYC YTDSGKVRAQ GFEAEISGSP IERLQLLAGY TYTQTKYLKT IEDSDPTELT
FTSSFIPRHM FKVWGDYQLG GALERWTLGA GLNSQSENFR TTRNTRVEQA GYTVWNGRVQ
YRLDQNWTVA LNGNNLFDKK YYATIGAPGW GNFYGEPRNF MVTLQGAF
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