| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1424 |
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| Symbol | |
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| ID | 5869189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1593459 |
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| End bp | 1595591 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546528 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001667667 |
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| Protein GI | 167032436 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.550485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCGC GTCACCCCCG CCTGCCCCTG AGCCTGCTCA GCCTGGGCCT GGCCCTGCAG
TGCCAAAATG TGCTTGCCGA AGACAGCGTG GTGCTGGCCC CACTGCAGGT CTCCGACACC
TACGCCAATG ACGGCTACCA GGCACGCCAG GCCGCTGTGA GCGGCTTCCA GCCTGCGCCG
TTGCTCGATA CACCGGCCTC TGTCAGCGTG TTCAGCCAGC CACTGCTGGA AGACCGCCAG
GTGCGCATGC TCAGCGAGGT GCTGCAAAGC GACGCCTCGG TCGGCGAAAG CTATGCGCCC
ATCGGCTACT ACGAGAACTT CAATGTACGC GGCTTCGAAC TGAATGCCGC CAGCAGCTAT
CGCATCAATG GCCAGACCAT CGCTGGCGAG CAGAACGTGG CCCTGGAGAA CAAGCAACAG
GTGGAGCTGC TCAAGGGCCT GTCCGGGCTG CAGAGCGGCG TTTCAGAACC GGGCGGCCTG
ATCAACTATG TGACCAAGCG CGCCGAAGAG GTACGCAGCC TTACGGTGTC TACCAACGAA
CAAGGCGAAC GCTACCTGGC CACCGACCTG GGCGGTTGGT TCGGCAGCGA AAAGCAGTTC
GGCCTGCGCG CCAACCTGGC CCACGAAGAT ATCCGCTCCT ACGTCGACCA CGCCGACGGC
AAGCGCGACT TCGCTTCGTT GGCATTCGAC TGGCAGATCA ACCCAGATGC CACCCTGCAG
CTGGATGCCG AGTACCAGCA CCGCGAACAA CGCTCGGTGC CGGGTTACCA ACTGCTCGGC
GGCACTGAAG TGCCCCATGG CATCGACCCG GATGATCGCC TGGCCTACCA GCACTGGGCA
AAGCCTGTGC AAAGCGACTC GCTGAACCTT GCTGGGCGCT TCGAGTACCG TTTCGACGAG
GCCTGGACCG GCACCTTGAG CGCCTCGCGC AGCAAGGTGG TGATCGACGA CTACAGCGCG
TTTGCCTGGG GCTCGAGCGA AGGCGCGTTT TTCGGCAGTA ATGGTGACTA TGACATCTAC
GACTTCCGCA GCCCCGACGA CACCCGCCGC ACCGACGAGG CGCAGGCCAT GCTCAACGGG
CGGTTCGATG CGCTGGGTGT GGGGCATGAG TTGACCATGG GTGCCAGCGC GCAGCGGCGC
ACACTGGATC AGCGGCCCAG CTATATGGAA TGGGTCGGCA CAGGCAACAT CCATACCGGT
GCGCCCGCCT TTGACCCCTC CGACAATCCC ATCAAGTCTA GCGAGCGCCG CCTCGATAGC
CGCCAGTACG GCCTGTTCAT CAGCGACCGG ATCAGCTTCA ACGAACAATG GCAGACTGTG
CTGGGCGCCC GAGAAGTGCG CCTGGATGAA AAGACCTGGG ACGAAAACGG CCTTGCCGGG
CGCCACACCC GTCAATACGA GCTGCTGCCC AACGCCGCGA TCATCTTCAA ACCGCAGCCC
AATACCACGG TATATGCCAG CTACGCCAAA GGCCTGTCAG CGGGCGGTAC TGCCCCCTGG
TTCGCCGAGA ACACGTTCGA GAACCTTGCG CCGACAACCT CCCACCAGCT GGAACTGGGC
CTCAAGCACG ACTGGCAGGG CCTGAGTTTC AGTGCCGCGC TGTTCCAGAT CCGCCAGGCT
TACCAGTACG CGCGCCCTGA CGGTGCCGGC CACTTCACTT ACGTGCAGCA AGGCCAGCAA
AAAAACACCG GCCTGGAACT GGGCGCCAGC GGCTGGGTGA CCTCGAACTT GCAGTTGCAG
GCCAGCGCAG CCGCCATTCG CGCACGGGTG CAGAACAGCG GTACCGAGGC TTATGAAGGG
CACCAGGCGA TCAACGTGCC AAAATTCCGA GCAGCGATGC ACGCGGAATA TTCGCTGCCG
GTTCCGGGGC TGGCGCTGTT GGGCGGGGCG CGGTACAGCG CCAGCAAGTA CGCGAGCCAG
GCGGGGAATG TGGAGGTTGG CGGGTATACC GTGTTCGATC TCGGCAGCCG CTACCGTACC
CGTATTGGTG GGTATGACAC GGTGCTGCGG TTGACCGTGG ATAACCTGTT CGACAAGCGC
TATTGGCGCG ATGTGGGGGA TTATCTGGGG GATAACTACC TGTTCCAGGG CGCGCCACGT
ACCGCCCGGC TTTCGGCTTC GGTCAGTTTC TAA
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| Protein sequence | MPSRHPRLPL SLLSLGLALQ CQNVLAEDSV VLAPLQVSDT YANDGYQARQ AAVSGFQPAP
LLDTPASVSV FSQPLLEDRQ VRMLSEVLQS DASVGESYAP IGYYENFNVR GFELNAASSY
RINGQTIAGE QNVALENKQQ VELLKGLSGL QSGVSEPGGL INYVTKRAEE VRSLTVSTNE
QGERYLATDL GGWFGSEKQF GLRANLAHED IRSYVDHADG KRDFASLAFD WQINPDATLQ
LDAEYQHREQ RSVPGYQLLG GTEVPHGIDP DDRLAYQHWA KPVQSDSLNL AGRFEYRFDE
AWTGTLSASR SKVVIDDYSA FAWGSSEGAF FGSNGDYDIY DFRSPDDTRR TDEAQAMLNG
RFDALGVGHE LTMGASAQRR TLDQRPSYME WVGTGNIHTG APAFDPSDNP IKSSERRLDS
RQYGLFISDR ISFNEQWQTV LGAREVRLDE KTWDENGLAG RHTRQYELLP NAAIIFKPQP
NTTVYASYAK GLSAGGTAPW FAENTFENLA PTTSHQLELG LKHDWQGLSF SAALFQIRQA
YQYARPDGAG HFTYVQQGQQ KNTGLELGAS GWVTSNLQLQ ASAAAIRARV QNSGTEAYEG
HQAINVPKFR AAMHAEYSLP VPGLALLGGA RYSASKYASQ AGNVEVGGYT VFDLGSRYRT
RIGGYDTVLR LTVDNLFDKR YWRDVGDYLG DNYLFQGAPR TARLSASVSF
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