| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0838 |
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| Symbol | |
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| ID | 5868597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 952047 |
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| End bp | 953210 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641545938 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001667084 |
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| Protein GI | 167031853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGTC CGTCCCGCTC AGTCATCCTC GCCGCCTTGG CGCTTCTGGT CCTGGTGGTA
GCGGGCATCT GGTTCGGCCA GCGCCAACCC GAACCGGCCG CCCGCGCACA AACCGCCATC
CCTGTGCGCG TTGTCAGCGT TGCCCAGCAA GACGTGCCGC GCTATGCCAG CGCCATCGGC
TCGGTGCTGT CGTTGCACAG CGTCGAGGTC AGGCCGCAAG TCGAGGGGAT ACTCACGCAA
GTGCTGGTCA AGGAAGGTCA GTGGGTCAAG GAGGGCGACC TGCTCGCCAC CCTCGATGAT
CGCAGCATCC GCGCCAGCCT CGACCAGGCC CGCGCCCAGC TCGGCCAAAG CCAGGCTCAG
ATCCAGGTGG CCGGCGTCGA CCTCAAGCGC TACCGCCTGC TCAGCAGCGA TGACGGCGTG
TCCAAGCAGA CCCTTGACCA GCAACAGGCG CTGGTCAACC AGTTGCAGGC CACGGTCAAG
GGCAACCAGG CCGCCATCGC CAACGCCGAG GTGCAACTCT CCTACACGCA GATCCGCTCG
CCGGTCACCG GGCGCGTCGG CATCCGCAAC GTCGACCCTG GCAACCTGGT GCGCACCAGC
GATACCCAAG GGCTGTTCAG CGTCACCCAG ATCGACCCGA TCGCCGTCGA ATTCGCCCTG
CCACAGCAAA TGCTGCCAAC CCTGCAGAGC CTGCTGAAGG CGCCAACCCC GGCGCTGGTG
CAGGCCTATA TGGACGCCGA TGGCGAACGC AGCCTGCTCG GCGAAGGCCA TCTGGCACTG
ATCGACAACC AGATTTCCGC CACCACCGGC ACCGTGCGGG TAAAAGCCGA GTTCGACAAC
AAGGACGGCC GCCTGTGGCC AGGCCAGTTG GTCACCATTC GCCTGCGCAC AGCTGTGGAA
GAAAACGCCC TGGTGGTGCC GCCGCCCGTG GTGCAACGCG GCGTCGACGG GCACTTCGTC
TACCGCCTGG ACGGCGACAA GGTCACCAGC GTGCCGGTCA AGGTGCTGTA CCAGGACAGC
GGGCTGAACA TCATAGCCGG GGTCAAGCCG GGCGAGCGCC TGGTGCTCGA TGGCCAGTCG
CGGCTCAAGC CGGGCTCACG GGTCGAGATC ACCCATGACG CCCCCGTGCC GTCGGAAATG
GCGGATCGCC GGAGCCAGCC ATGA
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| Protein sequence | MRRPSRSVIL AALALLVLVV AGIWFGQRQP EPAARAQTAI PVRVVSVAQQ DVPRYASAIG
SVLSLHSVEV RPQVEGILTQ VLVKEGQWVK EGDLLATLDD RSIRASLDQA RAQLGQSQAQ
IQVAGVDLKR YRLLSSDDGV SKQTLDQQQA LVNQLQATVK GNQAAIANAE VQLSYTQIRS
PVTGRVGIRN VDPGNLVRTS DTQGLFSVTQ IDPIAVEFAL PQQMLPTLQS LLKAPTPALV
QAYMDADGER SLLGEGHLAL IDNQISATTG TVRVKAEFDN KDGRLWPGQL VTIRLRTAVE
ENALVVPPPV VQRGVDGHFV YRLDGDKVTS VPVKVLYQDS GLNIIAGVKP GERLVLDGQS
RLKPGSRVEI THDAPVPSEM ADRRSQP
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