Gene PputGB1_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0529 
Symbol 
ID5868275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp604310 
End bp605011 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content51% 
IMG OID641545617 
Producthypothetical protein 
Protein accessionYP_001666776 
Protein GI167031545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.509897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.851974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGA AGCATCTCTT TCTAGATGAG CGCTTGAAAG GCAGATGCAC CTATTGCGGT 
GGGCCGCCGG AAACGGTTGA CCATGTGCCC TCCCGCGTTC TTTTGGATAA TCCACTTCCA
GCAAATCTTC CGGTCGTCGA AGCCTGCCAA AAATGCAACG GCGGCTTCTC GTTGGATGAG
GAATACATAG CGTGCCTGCT GGAATGCACC ATGTCCGGAA CAACCGAGAT CAGCGAGCTA
TCACGAGAGA AGATAAAGCA TGCACTAGCC CGAAATCCGC GATTGAGAAA TCAGTTGGAA
CAATGTCGTA GAACGGATGA CTGTGGACAT ATCTGGTGGC AGCCCGACGA AAGGAGAGTC
CGCAACGTAA TCATGAAGTT GGCGCAGGGG CATGCGGCAT ACGAGTTGGG AGAGTCCTGC
AACGATCAGC CTGACCATTA TTCGGTTCGC GCCATCCCAA CGATGACTAC TGAAGAGATA
AATGACTTCG AGATCCTTGA AGACTGCGTT CAGCCGCTAT GGCCTGAAAT AGGATGCCGT
GCGTTTCTAC GAGCATCGGG TAAACCCGTT CCTCCAATTC AAATTGGAGC ATGGTTGATC
ATACAGTCCG GACGCTACAG ATACCTGGTT GATTGGCAAG ATGGTGTCGA CGTCAGAATT
ATTATTGGCG AATATCTAGC CTGCCGGATA GTATGGTACT GA
 
Protein sequence
MDPKHLFLDE RLKGRCTYCG GPPETVDHVP SRVLLDNPLP ANLPVVEACQ KCNGGFSLDE 
EYIACLLECT MSGTTEISEL SREKIKHALA RNPRLRNQLE QCRRTDDCGH IWWQPDERRV
RNVIMKLAQG HAAYELGESC NDQPDHYSVR AIPTMTTEEI NDFEILEDCV QPLWPEIGCR
AFLRASGKPV PPIQIGAWLI IQSGRYRYLV DWQDGVDVRI IIGEYLACRI VWY