Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0529 |
Symbol | |
ID | 5868275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 604310 |
End bp | 605011 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641545617 |
Product | hypothetical protein |
Protein accession | YP_001666776 |
Protein GI | 167031545 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.509897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.851974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCCGA AGCATCTCTT TCTAGATGAG CGCTTGAAAG GCAGATGCAC CTATTGCGGT GGGCCGCCGG AAACGGTTGA CCATGTGCCC TCCCGCGTTC TTTTGGATAA TCCACTTCCA GCAAATCTTC CGGTCGTCGA AGCCTGCCAA AAATGCAACG GCGGCTTCTC GTTGGATGAG GAATACATAG CGTGCCTGCT GGAATGCACC ATGTCCGGAA CAACCGAGAT CAGCGAGCTA TCACGAGAGA AGATAAAGCA TGCACTAGCC CGAAATCCGC GATTGAGAAA TCAGTTGGAA CAATGTCGTA GAACGGATGA CTGTGGACAT ATCTGGTGGC AGCCCGACGA AAGGAGAGTC CGCAACGTAA TCATGAAGTT GGCGCAGGGG CATGCGGCAT ACGAGTTGGG AGAGTCCTGC AACGATCAGC CTGACCATTA TTCGGTTCGC GCCATCCCAA CGATGACTAC TGAAGAGATA AATGACTTCG AGATCCTTGA AGACTGCGTT CAGCCGCTAT GGCCTGAAAT AGGATGCCGT GCGTTTCTAC GAGCATCGGG TAAACCCGTT CCTCCAATTC AAATTGGAGC ATGGTTGATC ATACAGTCCG GACGCTACAG ATACCTGGTT GATTGGCAAG ATGGTGTCGA CGTCAGAATT ATTATTGGCG AATATCTAGC CTGCCGGATA GTATGGTACT GA
|
Protein sequence | MDPKHLFLDE RLKGRCTYCG GPPETVDHVP SRVLLDNPLP ANLPVVEACQ KCNGGFSLDE EYIACLLECT MSGTTEISEL SREKIKHALA RNPRLRNQLE QCRRTDDCGH IWWQPDERRV RNVIMKLAQG HAAYELGESC NDQPDHYSVR AIPTMTTEEI NDFEILEDCV QPLWPEIGCR AFLRASGKPV PPIQIGAWLI IQSGRYRYLV DWQDGVDVRI IIGEYLACRI VWY
|
| |