Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0115 |
Symbol | |
ID | 5867803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 118423 |
End bp | 119955 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545188 |
Product | sulphate transporter |
Protein accession | YP_001666367 |
Protein GI | 167031136 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00122172 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACATTA CACAGTTGAA AGCGGCCCTG CCGCGTGAGT TGCTGGCGTC GGTGGTGGTC TTCCTGGTGG CGCTGCCATT GTGCATGGGC ATTGCGATCG CCTCGGGTAT GCCGCCGGCC AAAGGCCTGA TTACCGGCAT TATCGGCGGC ATTGTCGTCG GTTTTCTGGC TGGATCACCG CTGCAGGTCA GTGGACCGGC CGCAGGCCTG GCAGTACTGG TGTTCGAGCT GGTGCGCCAA CATGGCATGC CCATGCTTGG GCCGATCCTG CTGCTGGCCG GCCTGCTGCA GTTGCTGGCT GGGCGTTTGC GCCTGGGCTG CTGGTTCCGC GTCACCGCGC CGGCGGTGGT GTATGGCATG TTGGCGGGGA TTGGGGTGCT GATCGTGCTG TCGCAGGTGC ATGTGATGTT CGATACGGCG CCGCAGCCTT CCGGGTTGCA GAACCTGCTG ACATTCCCGT CCACCGTTGC CGCAGCCCTG CCACAGGAAC GCGCAGGCGC TGGCTGGATG GCCGGTGCGC TGGGCCTCGG CACCATCGCC ATCATGTGGG GCTGGGAGCG CCTTCGGCCG CAGCGGCTGC GCTTCGTGCC GGGTGCCTTG CTCGGTGTGG CGAGCATGAC CGCCATCAGC CTGTGGCTGG CCTTGCCGGT GAACCGCGTA CAAGTGCCGG CAGACCTGTC CGAGGCCATT GACTGGATTC GCCCAGATGA CCTGATGCAA CTCGCCGACC CTACCCTGCT GGTCGCTGCC TTTGCCCTGG CGTTCATCGC CAGCGCCGAA ACCTTGCTGT CGGCCGCAGC GGTTGACCGC ATGCACAGTG GCCAGCGTTC GGACTTCGAC CGCGAGCTGT CAGCCCAGGG CATCGGCAAC ATGCTTTGCG GGGCGCTGGG TGCTTTGCCG ATGACCGGGG TAATCGTGCG CAGCTCGGCC AACGTGCAGG CGGGGGCGCA GACGCGGGCC TCCGCGATAT TCCATGGCCT TTGGCTGTTG GCTTTCGTGG TGGCGCTGAG CAGCGTGCTG CAGCAGATTC CGGTGGCGAG CCTGGCGGGT GTGCTGGTGT ACACCGGGGT CAAGCTGGTC GATTTCAAGG CGTTTCGTGG GCTGGGCCGT TATGGCCGCA TGCCGATGTT CACCTATGCG GTGACGGCGC TGGCGATCAT TTTCACCGAC CTGCTGACCG GCGTGATGCT GGGTTTTGCC CTGACCCTGC TGAAGCTGGC GTTCAAGGCG GCGCGGCTGA AGATCAACCT GGTCAGCCTG GAGAAAGCTG GGGATATGGA GCTGCGGCTC AGTGGTGCGG CGACGTTCCT GAAGGTGCCG GCGCTGACCC AGGTGCTGGA TACCGTACCG GCGGGCACTA CGTTGCACGT GCCGTTGGGT AACCTGAGCT ACATCGACCA CTCGTGCCTT GAGTTGCTGG AAGACTGGAA CCGCAGTAAT GGGGCGAATG GGTCGCGGCT GCTGATCGAG CAGCGGCGGT TGAAGCGGCG GATCGAGGGG AGGTTGCGGA CTACGGCGGG GATTGGGGCC TGA
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Protein sequence | MNITQLKAAL PRELLASVVV FLVALPLCMG IAIASGMPPA KGLITGIIGG IVVGFLAGSP LQVSGPAAGL AVLVFELVRQ HGMPMLGPIL LLAGLLQLLA GRLRLGCWFR VTAPAVVYGM LAGIGVLIVL SQVHVMFDTA PQPSGLQNLL TFPSTVAAAL PQERAGAGWM AGALGLGTIA IMWGWERLRP QRLRFVPGAL LGVASMTAIS LWLALPVNRV QVPADLSEAI DWIRPDDLMQ LADPTLLVAA FALAFIASAE TLLSAAAVDR MHSGQRSDFD RELSAQGIGN MLCGALGALP MTGVIVRSSA NVQAGAQTRA SAIFHGLWLL AFVVALSSVL QQIPVASLAG VLVYTGVKLV DFKAFRGLGR YGRMPMFTYA VTALAIIFTD LLTGVMLGFA LTLLKLAFKA ARLKINLVSL EKAGDMELRL SGAATFLKVP ALTQVLDTVP AGTTLHVPLG NLSYIDHSCL ELLEDWNRSN GANGSRLLIE QRRLKRRIEG RLRTTAGIGA
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