| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3629 |
|---|
| Symbol | |
|---|
| ID | 4571272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | + |
|---|
| Start bp | 2647 |
|---|
| End bp | 3624 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639753819 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_899474 |
|---|
| Protein GI | 118577234 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
|---|
| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGT CGCTTTTTGC ACTTGCGATA CTGATTTTAC TCCATGAGGC TGGGCACTTT
TTCGCAGCAA GGTGGTTTCA TATTTCGGTC CCTGAATTTT CAATCGGGTT TGGTGCTCGG
GTTTTTGGGT GGAAAAGGAA TGGCACCACC TACAACCTAC GTGCAATCCC CCTTGGTGGC
TACATAAAGA CAGATGACTT GTCAGGAAGA CCAGTACGAC AGAGAGTCCT GGTAGCCTTG
GCTGGGCCTG CAGCAAATCT CCTGTTCGCA TACCTGGTGT TCACGTTTAC TTCTTTTGTC
GGAGTTCCCC AGCTCACTAC CAGGATTGGA ACCGTCTTTA CCGGTCATCC AGCTGCCTCG
GCAGGTATAC AGCCAGGTGA CAGAGTAATA AGCGTCAACG GAACACACGT GACTACCTGG
ACAGAGATGA TCACATTGAT CGACCAGGGC CGCGATAGAG AGGTAAAACT CACAGTCGAA
ACAGAACAAA GAGACAGATC CATATCCCTG AAGCCTGAGA TCCGGGAGGG CAGGGGAGTG
ATCGGGGTAA AAGCGGACGG TGAGTCAACT TCGACCAGTT CTGGCGCTAA TGCGCCCCAG
GAGGGATGGC GATTGACGTG GAGTAATCTG AAGTCTTCCT CCGGAATGTT CCTGAGCCTG
GTCTCCTTCC AAAACTTCAA TAAGCTGGGC GGTCCTTTAT ACATCGCAAA GGCTGGCGCC
GAACAAAGTC ACCTTGGGAT GATACCACTA CTGTATTTCA TGGCTATCAT AAGCTCAAAT
CTCGTGACGC TGAATCTTTT GCCGATACCC ATACTAGATG GTGGCCTTGT GCTTCTGGCA
GCCTGGGAGG GCATATTTCG AAAGCCATTT AATGCGACAT TCACACGGGT TTTAACAGGT
CTCAGCCTTG GCTTGATGGT CTCTCTGGCG CTGTTTGCGC TGATCAACGA TATTGCAAGA
ATGATAAAAC CAAGTTAA
|
|---|
| Protein sequence | MMMSLFALAI LILLHEAGHF FAARWFHISV PEFSIGFGAR VFGWKRNGTT YNLRAIPLGG
YIKTDDLSGR PVRQRVLVAL AGPAANLLFA YLVFTFTSFV GVPQLTTRIG TVFTGHPAAS
AGIQPGDRVI SVNGTHVTTW TEMITLIDQG RDREVKLTVE TEQRDRSISL KPEIREGRGV
IGVKADGEST STSSGANAPQ EGWRLTWSNL KSSSGMFLSL VSFQNFNKLG GPLYIAKAGA
EQSHLGMIPL LYFMAIISSN LVTLNLLPIP ILDGGLVLLA AWEGIFRKPF NATFTRVLTG
LSLGLMVSLA LFALINDIAR MIKPS
|
|---|
| |