| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1813 |
|---|
| Symbol | |
|---|
| ID | 4572604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1944846 |
|---|
| End bp | 1947224 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639755862 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_901483 |
|---|
| Protein GI | 118580233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.530677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT CTTGCTGCAA CCGTAACCAG GCCCTGTTTT CCAATCCCCC GTCCATCGCG
GCGGGGCTTT CCGAACGTTT CTTCCACCAG GCCCGCGCCC TGGGGCTGAT GAGCGACTGG
CGACTGGCAC TCCTGGCAGC CATGGGGCGC AAGCCCTCCC TGGCCGGCTG GCGGGCGCGG
GACAGCCAGG ATCTGGGACT GATGCTGGTG GAGATGGGCG CCTATCTGGC CGATGTGGTC
AGCTTCTACG ATGCCCTGGT ATCCGGCGAG AGCTATCTCT CCACGGCAAC CCTGAACAAT
GCGTCCCGCC GACTGGTGGC GCTGCTTGGC TACCGCCCCC GCCCGGCGGT GGCCGCCCAG
GCGCTCCTGG CTGCCCAGGC GGACGGTACA CGGCTGGTGA CTCTCCCGTC TAGCACCGCC
TTCCGCAGCG GCTCGTTCCT GGACGCCTCC CTGACCCCAC AGCCTCCCCA GCTGTTCGAG
CTGACCCGGT CGGCCATACT GGAACCGCGC ATCAACCGCC TCAGCGTGGC GCCGGTGCAA
CGCCGTTCCC TCAGCGCCTC CTTCGACCGT CTGCAGGTGG AGCCAGGCAG CTGCCGCCTG
AAGGCGGGTG ATCCGCTGGT GCTCAGTTTC GACGGAAAAC TTCAGTGCTG CCGGGTGTTG
AGCATCCAGC CAACCATGTC CCGGGGGCGC GGCACTCCTC CCCTGGAGCT GCGCTTCACG
GCCCCTGTCT CACCGCCCGC CGGCGCCACC TACGCTTCGC TGCGCATTCT GGCGCCCGGC
AACTCCGCCC GGCTCTGGCA GGGGAGGGAG GGGGGCGACG GCACGGGGAG CACCGGCGGC
AGGACGCTGC TGCTGGATTC CCAGGTCCCC CTGCGGCCAG GGGAAGCGCT GCTGTTCGAG
ATGGGCCAGG CGCTGGAGGC GCGCCGAGCA ACGGCGGTGA GCGTCGGCCG GCGGGTGCTG
TGTTCCTCCC TCACAAGCCA GGTCAGGGAC AGCGACGACA CGGTGGAGCG GACCCTGGTC
AGCCCGGACA TCGCCATCTC CGTGACCAGT GTCACCCTGG ACAGTGCCCT GGTCTGGTCA
TCGCCCGATG TGGCCAGGAT AACGCTCTAC CACTCCTTAA GCGACGCAGC CAGGGTTCTG
GAGCCCGGCG GCCAGGTTCT CTCCCAGGGC GATGAGCTCA GCCTGCCGGG ACTGACGGAT
GGGCCGCGCA TCCCGGTCAG TCGCATGCTG CTCCGGGATG GCCACGGAGA GGCTGTCCAG
GTGAGCGGCA GCCTGGATAC GGCTGCTCGC TGCGCCACAG TGGACATGAA CCCGGCGTGG
GGCAGGTCCC TGGCCGCTCC GGTGCAGCTC ATGGGTAACG TGCTCAGCGT GTCACGGGGG
GAGTCGGTCA GCGGAGAACT GCTGGGGCTG GGAGACGCAT CCAGGCCATC CCAGACCTTC
AAACTGGCCA AAAAACCGCT CACCTACCTG AGCGCCGCCA CCAGCTCCGG CCTGGTCAGC
AGCCTCTCCC TGCGGGTGGG GGGCGTGCTC TGGAGGGAGG TGCCCAGCTT CTTCGGCTGT
TCATCCACCG ATCAGGTGTA TGTGGTGCGC CATGATGACG ACGGAGAGAC CTACGTCACC
GTCGGCCCTG CCGCCCGCCC CCCCAGCGCC AGCCGGATCG TTGCCGACTA CCGTTTCGGC
GCAGGAGCGG CCCAGCCGCC AGCCGCCAGC ATCAACCAAC TCGCCAGGCC GATTGCCGGG
CTGCGACAGG TGAGTAACCC GCTCTCCGCC TTTGGTGGCG CCGACGCCGA ATTGCCCGCC
GAGCTGGCCG CCAATGCGCC CCGCTCCGCC CTGCTGCTGG GGAGGGCCGT GTCGCTGGCC
GATCTGGCAG CGGCGACCGC GGCAGTTGCC GGGGTCAGGG GGGTTGCCGT ATCCTGGCGC
TGGGACGGCG CTGGCCTGCG TCCGGCCGCC CTGATCCACT ACATCGGCGA CAGTCAGCTC
CTCCCCCTGA TCCGTGCCCG GTTGCGCGAG CTGAGCGAAC CGGATGCGGC CATAACGGTG
GAACGTGCAG TGCCCCAGCT GGCTGCTCTG GCGCTGCAGC TGATCGTCGA CCCGCGTTAC
GAGACAGCCG ACGTGGCGGC CCGGGCCATG GAGCCGCTGT ACGCGGCGGG TAACGGCATG
CTGCGCCCCG AGCGCCTGGG ACCGGACGGC GGGGTGTACC TGAGCCGGCT CCTGGAGTCG
GTCATGGACG TGGAAGGGGT GACTGACGTG CGCTCGGTCA GCTTCAACGG AACGCTGTTC
AGCGCCGCCG TCCGCACGCC GCCGGCCGGC CATTACTGGG ACTTCGGTGA GCCGGGCATG
TCGGGATTCG GCATCGCCAT CAACGGGATC AACGGATGA
|
|---|
| Protein sequence | MSDSCCNRNQ ALFSNPPSIA AGLSERFFHQ ARALGLMSDW RLALLAAMGR KPSLAGWRAR
DSQDLGLMLV EMGAYLADVV SFYDALVSGE SYLSTATLNN ASRRLVALLG YRPRPAVAAQ
ALLAAQADGT RLVTLPSSTA FRSGSFLDAS LTPQPPQLFE LTRSAILEPR INRLSVAPVQ
RRSLSASFDR LQVEPGSCRL KAGDPLVLSF DGKLQCCRVL SIQPTMSRGR GTPPLELRFT
APVSPPAGAT YASLRILAPG NSARLWQGRE GGDGTGSTGG RTLLLDSQVP LRPGEALLFE
MGQALEARRA TAVSVGRRVL CSSLTSQVRD SDDTVERTLV SPDIAISVTS VTLDSALVWS
SPDVARITLY HSLSDAARVL EPGGQVLSQG DELSLPGLTD GPRIPVSRML LRDGHGEAVQ
VSGSLDTAAR CATVDMNPAW GRSLAAPVQL MGNVLSVSRG ESVSGELLGL GDASRPSQTF
KLAKKPLTYL SAATSSGLVS SLSLRVGGVL WREVPSFFGC SSTDQVYVVR HDDDGETYVT
VGPAARPPSA SRIVADYRFG AGAAQPPAAS INQLARPIAG LRQVSNPLSA FGGADAELPA
ELAANAPRSA LLLGRAVSLA DLAAATAAVA GVRGVAVSWR WDGAGLRPAA LIHYIGDSQL
LPLIRARLRE LSEPDAAITV ERAVPQLAAL ALQLIVDPRY ETADVAARAM EPLYAAGNGM
LRPERLGPDG GVYLSRLLES VMDVEGVTDV RSVSFNGTLF SAAVRTPPAG HYWDFGEPGM
SGFGIAINGI NG
|
|---|
| |