Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1074 |
Symbol | |
ID | 4575040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1125760 |
End bp | 1126557 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639755113 |
Product | ABC transporter related |
Protein accession | YP_900757 |
Protein GI | 118579507 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCACGG CTATTCCCCT GAAGCGGACC GACAGGCGAG CGAACGTCAT GCTGCGCCTG GAAGGGATCG GCATCGTACG AAGGGAAACG GACGGCACGG AGCGACGCAT TCTGGACGAC GTACACTGCT ACGCCCACAG CGCCCAGATC ACCACCATCG TGGGACCGTC CGGCGGGGGG AAAAGCAGCC TGATCCGGCT GATCAACCGC CTGGACGACC CGACCTCAGG AACGATCCGG CTGAATGGAA CCGACATTTC CCAGCTCGAC CCACTGGAAC TGCGCGGCCA GGTGGCCATG GCGCAGCAGA AGCCGTTCAT GTTCGAGGGA ACCGTGCTGG ACAACCTGCA ACGCCCCTTT AACTACCGCA AACAAACGCC TCCCCAAGCC GACACCCCCG ACCTGCTCCA CTCTCTGGAA CTTGCCCGCA TACCGGTCAC CCTGCTCAAG CGCGACGCCC GCACCCTCTC CCTGGGGGAA CAGCAGCGGG TGGCGCTCTG CCGCGCCCTG CTCACCAAAC CGGTGCTGCT GTTGCTGGAT GAACCGACCA GCGCCCTGGA CCGGCCCACG GCAGACCACC TGGCCACCAC CTTCCGGGAG ATCTGCCACA GGGAACGGCT GGCGATCATG CTGGTGACCC ACGACCTGCG CCTGGCGGAA CAGGTCTCCG ATTATCTCTA CTATCTGGAG GAGGGGCGCA TCAGGGAGGA GGGGGAACCG GCCGAGCTGT TCTCCACCCC GCGCAGCGAA GAGTTGCGCC GGTTCCTGGG CAAGCCTGAA AGGGAAGGAA GCCACTGA
|
Protein sequence | MATAIPLKRT DRRANVMLRL EGIGIVRRET DGTERRILDD VHCYAHSAQI TTIVGPSGGG KSSLIRLINR LDDPTSGTIR LNGTDISQLD PLELRGQVAM AQQKPFMFEG TVLDNLQRPF NYRKQTPPQA DTPDLLHSLE LARIPVTLLK RDARTLSLGE QQRVALCRAL LTKPVLLLLD EPTSALDRPT ADHLATTFRE ICHRERLAIM LVTHDLRLAE QVSDYLYYLE EGRIREEGEP AELFSTPRSE ELRRFLGKPE REGSH
|
| |