Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1017 |
Symbol | |
ID | 4572842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 1065831 |
End bp | 1067087 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639755056 |
Product | phage integrase family protein |
Protein accession | YP_900701 |
Protein GI | 118579451 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0440345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGTC TTTTAAAACG CGGCAAAAAA TTCTACGCAC AGTACTATCT GAACGGCGAG CAGAAGCGGG TCAATCTGAA TACGACCTCG CTGCAGATCG CCAAGGAAAA AATCCGGCAG ATCGAATCCG CCCTGTTCCG CCAGGACGAC ATCCCCCTCA CGACCAAGAC TCCTCTCCCC GAGATCATCG AGAAGTACCT CTTTTTCCGC AGGGCACGCT GTTCGGAAAA CAACGTCCAG AAGCAGATCA CCTATTTCAG AAGCATCTTC GGCCCGGTCT GCGAGAGCCT CAAAATCAAA AACCCCAAAA TCGCCCGAAA GGCCGTGAAA CGCCCCGCTG CCCAAAAATA CGACCTGCTT GAGCTCGGAG CCCTGGAGCA GTTATCCGCA GAACGGGTTT CGTTATTCCT GGCAACCATC AGCAAACAAA AAGCGCTCTC TCCCAAAACG GTCAATCACT ATCGTCAGAT ACTTATAACC TTCTGCAACT GGGCCATGAA AGAAGGAGGC GTACGGTTCC CCGGCGGCAA AAACCCGTTG GCAGATATCA GTCGTTACAA TGAAGTGAAG AGTGATATCA GCTACCTGAA GCACCAGGAC ATCGCTAAAC AACTCGATGC CCTGGCAGGC AACCTGCTTC TGCAGACCAT GGTCGCCACC TATATCTATA GCGGCCTGCG GAGGGAGGAA GCGCTCTGGC TGATGCCTTC CGACTTTGAT TTCACTGAGG GCCACTACGG GACCATCAGA ATCCGAAACA AGGAATTCGA CGGCAAACGC TGGAAACCCA AAACCAGTAT AAACCGGACC GTGCCGATCA GCAGCGATCT GCGCCGCTAC CTGGATAAAT ATCTCGAAAA GGTCACTCCC GGAACCTGGT TTTTCAGCAC GCCCGAGGGG TGCCGCTGGG ACCCGGATAA TTTTTCCGCG CTGCTCCGCG CCGCCAACAA GGAAAAAAAA CTCAGCTGGA CCTGCCTGGA CTACCGGCAC ACCTTTGGTA CACTCCTCGC ATCCAATGGC GAGAGCCTCT TCAAGGTCGC CAAACTGATG GGGAACAGCA TTCTTATCTG CGAAAAACAC TATGCGACAG CGTTGCCCGA ATCCCTGCAC GCCTCGGTGG AGTTTGGCGA TGACCCACAA CAGCCGGCCC CGCCTCATCC CGCCCCACCC CAGCCCCCCG CTCCTCCCCA GCCTTCAGCC GCTGAACCGC CTGCCGAAAC ACGGCCCCGG TTGAAGTTGG TGGTCAACAA CCGCTAA
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Protein sequence | MASLLKRGKK FYAQYYLNGE QKRVNLNTTS LQIAKEKIRQ IESALFRQDD IPLTTKTPLP EIIEKYLFFR RARCSENNVQ KQITYFRSIF GPVCESLKIK NPKIARKAVK RPAAQKYDLL ELGALEQLSA ERVSLFLATI SKQKALSPKT VNHYRQILIT FCNWAMKEGG VRFPGGKNPL ADISRYNEVK SDISYLKHQD IAKQLDALAG NLLLQTMVAT YIYSGLRREE ALWLMPSDFD FTEGHYGTIR IRNKEFDGKR WKPKTSINRT VPISSDLRRY LDKYLEKVTP GTWFFSTPEG CRWDPDNFSA LLRAANKEKK LSWTCLDYRH TFGTLLASNG ESLFKVAKLM GNSILICEKH YATALPESLH ASVEFGDDPQ QPAPPHPAPP QPPAPPQPSA AEPPAETRPR LKLVVNNR
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