Gene Ppro_0993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0993 
Symbol 
ID4573215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1038165 
End bp1038746 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content45% 
IMG OID639755033 
Productfimbrial assembly family protein 
Protein accessionYP_900678 
Protein GI118579428 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA TTAACCTCTT GCCGGTCAGG GCTGCAAAAA AGAAGGAGAC TGCCGTTCAG 
CAGATTGCTA TTTTCTGCGC CGGCGTCGTG CTTGTGCTGG CCGTAATTAT GACCATGTTT
TTTGTGAAAA AAACGCAGAT AGCGGATACA AGAAACGATA TTGCGACAGC AAACGATAAG
ATTAATGAGC TGAAAAAGAG AATCGGAAAG CTGGAGGAAT TGAAAACACT CAAAGATCAG
GTCAAGAAAA AACTAGATGT CCTGACCCAG TTGCGCAAGA ACAAAATCGG CCCTGCGCGT
AGGCTTGCCA CCCTGAGTGA CTGCACTCCT GATAAGTTGT GGCTTACTTC CTATGGCGAA
ACAGGTACTG ATATCAAGAT CTCGGGCTTT GCCCTCAATG AGGACCTGAT AGCGGCCTTT
ATGAGAAATA TCGAATCGTC ATCCGATTAT ATGGGAGTTG AACTTCTTGT TTCCGAACAG
AAAGAGATGG ATGGCTCAAA AATTAAACGC TTCGATCTTG CATGCAAACT ACAAATGTCC
AATGAGCCCC CAGCGGAAGA GAAAGCTTCC GTACCCCAAT AG
 
Protein sequence
MIKINLLPVR AAKKKETAVQ QIAIFCAGVV LVLAVIMTMF FVKKTQIADT RNDIATANDK 
INELKKRIGK LEELKTLKDQ VKKKLDVLTQ LRKNKIGPAR RLATLSDCTP DKLWLTSYGE
TGTDIKISGF ALNEDLIAAF MRNIESSSDY MGVELLVSEQ KEMDGSKIKR FDLACKLQMS
NEPPAEEKAS VPQ