Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0979 |
Symbol | |
ID | 4573201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 1020983 |
End bp | 1021837 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639755020 |
Product | polysaccharide deacetylase |
Protein accession | YP_900665 |
Protein GI | 118579415 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGCGA AGAAACGTCC GCGGGTCTGC CGCGACAGGA GCGGTGTTGT TGCGGTAGTT CGCCTGATGC GTCCATTCGC CTGCGCCCTG CTCATGCTCT TCTGCGGAAA TCTCCCCGCC GTCGCCGGGT CGGAACCCAC GCTGGAGTCG ATTCGGGAAC AGCTCAGCCT GGAGTTTCGC GGACGTGTCC CGCGGGAGTG GGGCGAGCGG GTGAAGGGAG TGCACACAAG GCTGAAGACT TCCGACAGGG TGGTTGCGCT CACCCTGGAT GCCTGCGGCA GTCCCCGGGG CAAGGGAGTT GATTCCGCCC TGCTGGCCTT CCTGGAGCGG GAGCGGATAC CGGCCACGCT CTTCATCAAT GCCCGCTGGA TCGACGCCAA TCCCACCCTG TTCAGGCAGC TGGCCGCCAA TCCACTCTTC GAGATAGCCA ACCATGGATT GCATCACCGT CCCGCCTCGG TTTCCGGGCG TTCCGCGTAC GGAATTGCCG GTACCGGGAA CGTGGGCGAA CTGGTGGAAG AGATCGAGGG CAATGCCCGC AAGATAGGTG CCCTGACCGG TGTCCGCCCC CGTGTGTATC GTTCGGGCAC CGCCTATTAC GATGACCTGG CCGTGGAGGT TTCCAGACGG TTGGGGCATG CGGTGGCCGG TTTTTCCGTT CTTGGCGATG CCGGAGCCAC CTTTCGCAGG GCACAGGTCA GGGATGCGCT GCTCAGTGCC CACGCGGGTG ACATTGTGCT CCTGCACATG AACCACCCGG AGGGGGAAAC CGCGGCCGGA GTGATTGATG CCCTGCCTGA GTTGCTGAGG CGTGGATTCC GTTTCGTCAA ACTGTCCGAC TACCCCCTGG AGTAG
|
Protein sequence | MIAKKRPRVC RDRSGVVAVV RLMRPFACAL LMLFCGNLPA VAGSEPTLES IREQLSLEFR GRVPREWGER VKGVHTRLKT SDRVVALTLD ACGSPRGKGV DSALLAFLER ERIPATLFIN ARWIDANPTL FRQLAANPLF EIANHGLHHR PASVSGRSAY GIAGTGNVGE LVEEIEGNAR KIGALTGVRP RVYRSGTAYY DDLAVEVSRR LGHAVAGFSV LGDAGATFRR AQVRDALLSA HAGDIVLLHM NHPEGETAAG VIDALPELLR RGFRFVKLSD YPLE
|
| |