Gene Ppha_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2601 
Symbol 
ID6461346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2685330 
End bp2686235 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content52% 
IMG OID642728757 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_002019379 
Protein GI194337585 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGAA GAGGGAGAAA CAACGGGGAA TTTTCACAGA AAGCCCTCTA TTGGCTCATC 
ATGATGCTTG GAGCGCTTGT CAGAAACATC AGTCGCAAAC GCTCAACCGC CATAGCCCAT
CTCCTCGGTG ATTTTGTTTT TTACATCCTT CAAACAAGGC GCTCCCTTGT GACCGGGAAT
CTTGCGCTCA CCTTTCCCGA AAAAAGCAGC GCGGAAATCA AAGCCATTGC CTCCAGGGTT
TATCGCAACC AGGCTGAAAA TATTATTGAA ATGCTTCGTC TTCCCATGAT CAAAACAGCG
GACGATGCAC GCCATCTCCT CAACGTTGAT GCTGCTGATT TTCTTGCAAA AACCACTGGC
AATAAAAAAG GAGGAGTACT CGTTTCAGCC CACTTTGGCA ACTGGGAGCT GCTCGGTCTC
TGTTCCGGCC TGCTGGTTGC TCCTCTGACC ATCGTAGTAA AACCGTTGAA AAACTCCCGG
ATTGACAGCC AGATCAACGC CTGGCGAACC ATGCAAGGCA ACCGGGTCAT CTACAACGGG
CAGGCTCTTC GCGAGGGGCT GAGAACGCTC CGCCGGGGAG AGATTCTTGT CATGCTTGGC
GACCAGTCTG CACCCGGGGG CTCCTTTATT ACCGGGTTCC TTGGACGTCG AACCTCCGTT
TTTCTCGGGC CCGCCTGGCT TGCCCTTAAA GCAGGGGTAC CGCTTTTTGC TGCCATGTGC
CGCAGAACGG GAGATGGCCG CTATAAGGTC GATTATGAAG AGATTGGATA CAGCGATCTC
GGTACCAGCA AAGAGGACGC CGAAGAACTT GCCCGCCGAT ACACCAAAGT ACTTGAGCGC
TCTATCTATC AATACCCTGA AGAGTGGTTC TGGCTGCACA ACCGGTGGAA AAGGATGGAG
TTGTAA
 
Protein sequence
MQRRGRNNGE FSQKALYWLI MMLGALVRNI SRKRSTAIAH LLGDFVFYIL QTRRSLVTGN 
LALTFPEKSS AEIKAIASRV YRNQAENIIE MLRLPMIKTA DDARHLLNVD AADFLAKTTG
NKKGGVLVSA HFGNWELLGL CSGLLVAPLT IVVKPLKNSR IDSQINAWRT MQGNRVIYNG
QALREGLRTL RRGEILVMLG DQSAPGGSFI TGFLGRRTSV FLGPAWLALK AGVPLFAAMC
RRTGDGRYKV DYEEIGYSDL GTSKEDAEEL ARRYTKVLER SIYQYPEEWF WLHNRWKRME
L