| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2580 |
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| Symbol | |
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| ID | 6463699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2647299 |
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| End bp | 2649809 |
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| Gene Length | 2511 bp |
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| Protein Length | 836 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642728737 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002019359 |
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| Protein GI | 194337565 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA AACATGCGAA CATGTATCGC ATTTTCCGTT TTGTTCTTTC AGCGTTCTGC
CTCATGGCAA TGCTGGTACC TCTCCCCTCC TACGGAGCTG ATACCGGCAC GGTAAAAGGC
AGGGTCATCG ACAAGGCAGA CGGAGAGGGA GTTTATGGCG CGTCAGTCAC TATTGCCGGT
ACCACTATCG GCACGGCAAC CGACATGAAC GGCAACTTCA TCCTTCAGAA CGTACCTGCA
AAATCACAGA AAATCTCCGT ATCCATAGTC GGTTACGCCC CGACGAGCCA GATAGTTACT
GTCGGCACCG GCCAGACAGC CAGTATAAGT CTGCAGCTTG GCCAGACCAC CGTTATGGCA
TCGGAAGTCA TTGTCGGCGC GGCGCTCTAC AAGCAGGACA GGCTTGAAGT TCCGGTGACT
GCCAACGTGG TTTCTGCCGA AAAAATCAAA CAGGAACCTA ACCCGACCCT CGATCAGGTA
GTTGAGGACA TCCCTGGCGT TGTTGTTACC CGTGCAGGAG GACAAACAAC CTCCACCCTG
CAGATCCGCG GATCCAACAC TTATCAGGGC GGTGCAATCG GCACCCGCGT GCAGGGCTTC
TATGACGGGT TCCCGCTCAA CAGCCCGGAA ACCGGTGAAG TTGTATGGTC TTCGGTCAAC
ATGAACGCAG CCGACAAGGT CGAGGTGCTC AAAGGTTCAG CAGCAACCCT CTACGGATCG
GGCGCCATGG GCGGCGTGGT TAACGTGTTC GGCCACCTTC CGGAAACCCT TGAAGTGAAA
GCCGGATCAA GCGCAGGCTT TTACGATGCG CCTCCTTCCG GTGACAAGAG CGTTTACCGC
GACGGCTACA CCCCGTGGTT CTGGAACAGC TATTTAGGCA TCGGCAACAA GAGCGGCAAG
CTCAGCTACA GCCTCCTCTA CTCGCACAGC GAGGACGACG GTTACCGCCA GAATGCACAG
ACCCTGCTGA ACGACGTCAA GCTGAAAGCG CGCTACGACA TCGATGCAAA ACAGTACCTG
CAGCTCAGCG CCTTTTATAA CGAAACGGAG GGCGGCTACG CATACACATG GCCTTATGAC
GCGACAGTTG CAACCGGAAC ATTCATCCCT CACCCTGAAC TTGCCTACGA TGTTTATGTG
AACGCCCGAT TCCCTGCAGC AGGGCCTTAC ACGAAATACG ATGTCTATAC AGACGATCTC
ATCAAGCGGA AGAACGCTCT GGCGGGCCTG AACTACGTAA ACTTGCTGAG CGACAACCTC
ACCCTTGACA CTCGGCTCTA CTACACTCGC AACGCAACCA CTTACGAGTA TAACAATACG
CCGGCAAATC AGATGTATGC AACCGGCGCC ACCCGCTATC CGGGTGAATT CAATGAAACC
AGCTCGAACC GGTACGGAGC AGGTGCAAAA CTTGACTGGA GAGTAAGCGA CAGCCATCGC
CTTCTTTTCG GTCTTGACGG CAACATTATT GACGTTCAGT CAACGCAGTA CACAGGGGAA
ATTCCCTCGG CACACCCTTT AAGCAATAGT GACCTCAACG ATATACAGGA AAAAAACTTT
GCCGCATTCG TGCAGGACGA GTGGAAACTC ACTGACAAGC TGACTGCCCT GCTCTCCCTG
CGGTATGACT GGAGCGGTAT CGATGCTGAT GAGGTTACGT ATGTTGACTA CACAACTCCT
GCTCCAGGTT TTCCTCCATC ATATCCGAAT ACGCCAACTG AATCAATTGA AAACCCGTCG
GTCGATGCCA TCAGCCCTCG TATCGCGCTC AACTACAAGG CCACGGACGA CATGAGCTTC
CGCGCATCGT GGGGTACAAG CTTCCGCGCA CCGACGCTTG CAGAACGGTT TGTCCGAGAT
GCCGGAATCC TTAAAGGCGT ACCGAACCCG GCGCTCGACA AGGAGACCAT GACCGCCTAC
GAGATCGGCG TCTACAAGCA GTTCGGCGAC AAGGTCTCGC TCGACGTGGC CGCATTCCTC
AACGATTACG ACAACCTGAT CGAATCGGTC AAGCTGCAGG GGACAACATT CGAATTCCAG
AACATCACGA AGGCCCGTAT CTGGGGCATC GAGACCAACC TGAACATCCG CCCGAATCCT
TCGTGGAACG TCAATCTGGC TTACACCTAC ATGAACGCCA AAAACACCGA CTACAAGCCA
AGCACCCCTG CGGTTGCCAT CGACTCCAAT CCCGATCCGG AATGGCTGCC CATGCGGCCG
GAACATACCG CATCAGTTGG CGTAACATGG AAACCCGTCA ACAGGCTCGC ACTGAACCTG
AACGGACGCT ATGTCGGCGA GTACAAGGCC GTGAATCTCT ATACAAATAC CGAAGGCAAC
AACTACCCCG GCGACTTTAT CGTCTTCAAC GCCGGCGCGA AGTACAAAAT CACCGACAAC
ATCGGAGCTA CATTCCTCTG TAACAACATC GGCAACGTGC AGTATGAAGA AGCCGAATGG
TTCCGTGCTC CGGGACGCAG CTTTGTTGCA GGAATGGATT TCACCTTCTA A
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| Protein sequence | MKTKHANMYR IFRFVLSAFC LMAMLVPLPS YGADTGTVKG RVIDKADGEG VYGASVTIAG
TTIGTATDMN GNFILQNVPA KSQKISVSIV GYAPTSQIVT VGTGQTASIS LQLGQTTVMA
SEVIVGAALY KQDRLEVPVT ANVVSAEKIK QEPNPTLDQV VEDIPGVVVT RAGGQTTSTL
QIRGSNTYQG GAIGTRVQGF YDGFPLNSPE TGEVVWSSVN MNAADKVEVL KGSAATLYGS
GAMGGVVNVF GHLPETLEVK AGSSAGFYDA PPSGDKSVYR DGYTPWFWNS YLGIGNKSGK
LSYSLLYSHS EDDGYRQNAQ TLLNDVKLKA RYDIDAKQYL QLSAFYNETE GGYAYTWPYD
ATVATGTFIP HPELAYDVYV NARFPAAGPY TKYDVYTDDL IKRKNALAGL NYVNLLSDNL
TLDTRLYYTR NATTYEYNNT PANQMYATGA TRYPGEFNET SSNRYGAGAK LDWRVSDSHR
LLFGLDGNII DVQSTQYTGE IPSAHPLSNS DLNDIQEKNF AAFVQDEWKL TDKLTALLSL
RYDWSGIDAD EVTYVDYTTP APGFPPSYPN TPTESIENPS VDAISPRIAL NYKATDDMSF
RASWGTSFRA PTLAERFVRD AGILKGVPNP ALDKETMTAY EIGVYKQFGD KVSLDVAAFL
NDYDNLIESV KLQGTTFEFQ NITKARIWGI ETNLNIRPNP SWNVNLAYTY MNAKNTDYKP
STPAVAIDSN PDPEWLPMRP EHTASVGVTW KPVNRLALNL NGRYVGEYKA VNLYTNTEGN
NYPGDFIVFN AGAKYKITDN IGATFLCNNI GNVQYEEAEW FRAPGRSFVA GMDFTF
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