| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2473 |
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| Symbol | |
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| ID | 6461026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2562264 |
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| End bp | 2562992 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642728652 |
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| Product | protein of unknown function DUF541 |
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| Protein accession | YP_002019274 |
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| Protein GI | 194337480 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2968] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.065986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC GACCGATTTT TTTTACACTC TGGCTGTTTT TCATAACAGC AGGTATCTCC
TCAACAGCTT GTTCTGAGGA GAGTCAGGTT CTGGTGTCAG CTTCTGGTAC CGTTTCGGTA
AAGCCTGATA TTGCGGAATT CGGGGTTGTC GTTAAAACGG ATGCTAAAAG TGCCGACAAG
GCTGCTGCCG AGACTGCCGA AAAGTATCGT CGTGTGCAGG CTGCACTCAG GGCTGCGGCT
GTTCCTCTTG AAGATGCGCC AACAGCAAGT TATACGGTCT CTCCTCTCTG GGAGTGGAAT
CAGTCGCTGG GAAAGAGTTT GCTGAAAGGC TACAGTGCAC GCCATACGAT CATGGTGAAG
GTGCGTACGC TGGGCTTGAT CGGCAGGGCC ATTGATGCTG CCGTACAGGC TGGAGCCGAT
GAGGTGCAGG GTATCACTTT TTCATCAGGC AGTTACGAAG CGCTGCGTCA GCAGGCTCTG
GCTGCTGCGG TCAGTAATGC CCGCAGGGAT GGAGAAATCA TGGCCCGGGC CGCAGGCGGG
CATCTTGGCC AGTTGATTGA GGTCAGCGTC AGTCAGCCAC TCTATGGCGG CAGACCGGTC
ATGGATGCTA TGGCATTAAG GGCTGCTCCG GCGGCGCCAG CTCCGACTGA AATCGCCCCC
TCTGAGCAGG ATATTGTTGT CACCGTCAAT TCCCGCTGGC GTTTTGTTCC GGCTCCGGCC
ACTAAATAA
|
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| Protein sequence | MKKRPIFFTL WLFFITAGIS STACSEESQV LVSASGTVSV KPDIAEFGVV VKTDAKSADK
AAAETAEKYR RVQAALRAAA VPLEDAPTAS YTVSPLWEWN QSLGKSLLKG YSARHTIMVK
VRTLGLIGRA IDAAVQAGAD EVQGITFSSG SYEALRQQAL AAAVSNARRD GEIMARAAGG
HLGQLIEVSV SQPLYGGRPV MDAMALRAAP AAPAPTEIAP SEQDIVVTVN SRWRFVPAPA
TK
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