| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2303 |
|---|
| Symbol | |
|---|
| ID | 6461170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2382185 |
|---|
| End bp | 2383189 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642728492 |
|---|
| Product | Bile acid:sodium symporter |
|---|
| Protein accession | YP_002019115 |
|---|
| Protein GI | 194337321 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000645275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAAAT TACTTTCTTT GCTCCAGAAA CATCTGGTTT GGAGCATTCC TCTCGCCATG
CTGGCCGGGC TGTTGTTCGG ATTAGCGACC GACGCGGCTT TTCTGCGCTG GACCATTCTT
CCGCTTACCT TTCTCATGGT CTATCCTATG ATGGTTACGA TGAATGTGCG AGAGCTTCTC
AATCCTGGCG GCAACAAACT GCAGGGCGTT ACGCTTGCTC TCAATTTTCT CGTGATGCCC
GCCATTGGTT ATGGAATTGG CCTGTTGTTT TTCGCCGATC AGCCCATGGT CAGGCTTGCA
CTGCTGCTGA CATCACTGCT GCCTACCTCC GGCATGACCA TCTCCTGGAC AGGTTTTGCC
AAAGGGAATG TGCCTGCAGC GGTCAAAATG ACGGTGATTG GTTTGATCGC AGGTTCTCTG
CTTGCGCCGC TCTACCTCAA TGTGCTTCTG GGTGCGGTGG TCGAAATCCC GCTGTTACAG
GTATTCATGC AAATCGGGTT AATTGTTTTC CTGCCGTTGG TGCTTGGTAC CGTTACCCAA
CGCTGGCTGG TGAAGAGCTA TGGAGAGCGG GAGTTTAATC AGCGCTTCAA GCCAAAGTTT
CCTCCCTTTT CGACGTTGGG CGTTCTCGGT ATTGTGTTTG TATCCATAGC TCTCAAGGCA
AAAAGTATCT TTGCGAACCC GGCAATGCTG CCGAATCTGC TTTTACCGCT GGTGTTGCTC
TATACGATCA ATTTTATCAT CAGTACGCTC GTTGGCAAGA GCCTGTTCAA GCGAAGCGAT
GCCATTGCTT TTGTTTATGG TACTGTTATG AGGAACCTCT CGATTGCGCT TGCGATTGCC
CTTGGTGTGT TCCGCGAAAA GGGCGCTGAT GCTGCGCTGT TGATTGCATT GGCCTATATC
GTTCAAGTGC AGGCTGCGGC ATGGTATGTA AAGTTAACCG ACCGCCTCTT CGGAGCCCCG
CTTTCCAGCC CTGCCATGGC GTCCGAATCT GTCAAAGGAG GCTGA
|
|---|
| Protein sequence | MWKLLSLLQK HLVWSIPLAM LAGLLFGLAT DAAFLRWTIL PLTFLMVYPM MVTMNVRELL
NPGGNKLQGV TLALNFLVMP AIGYGIGLLF FADQPMVRLA LLLTSLLPTS GMTISWTGFA
KGNVPAAVKM TVIGLIAGSL LAPLYLNVLL GAVVEIPLLQ VFMQIGLIVF LPLVLGTVTQ
RWLVKSYGER EFNQRFKPKF PPFSTLGVLG IVFVSIALKA KSIFANPAML PNLLLPLVLL
YTINFIISTL VGKSLFKRSD AIAFVYGTVM RNLSIALAIA LGVFREKGAD AALLIALAYI
VQVQAAAWYV KLTDRLFGAP LSSPAMASES VKGG
|
|---|
| |