Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1851 |
Symbol | |
ID | 6463371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 1945165 |
End bp | 1945647 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642728061 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002018695 |
Protein GI | 194336901 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATAA GCAACATGAA AGAAAAAATT GATAACCTCC TGTCAAAAGA GCCTTCGAGG TGGATGGAAA AAGCGTTACG CGATGAGGTA AATGAGGCTT GGCTGGAGAG GTCTTCCAAT ATTGCACTGC GTATTCTTGG TGCTTTACAG GCAAATAGAA TGACGCAGAA AGAGCTTGCT GAAAAAACCG GAGTCAGCCC TCAGCAGGTA AGCAAACTGC TCAAAGGGAA TGAAAATCTT ACCCTTGAAA CCATAGCAAA GTTTGAGGCT GCCCTTTGTA TAGTGCTCAT TGCAATACCG GAAAGCGTTA GCGGGAGTGA GGCTGAATTG AGCACTGCAC ACGTTCAAAA AAAATCTGCA TCAAGGATAA GAGGATCAAA AGCTTTGCTA TCCGCTCCTC AAGGCCGTGC AGCAGAAAAA GTTCACGAAG CCGGGTCAGG TTATGGAAAA AAGGCAAGGA AAAAGGTAAA CATCAGAGGT TAA
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Protein sequence | MTISNMKEKI DNLLSKEPSR WMEKALRDEV NEAWLERSSN IALRILGALQ ANRMTQKELA EKTGVSPQQV SKLLKGNENL TLETIAKFEA ALCIVLIAIP ESVSGSEAEL STAHVQKKSA SRIRGSKALL SAPQGRAAEK VHEAGSGYGK KARKKVNIRG
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