| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1241 |
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| Symbol | |
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| ID | 6463789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1298014 |
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| End bp | 1302114 |
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| Gene Length | 4101 bp |
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| Protein Length | 1366 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642727488 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002018129 |
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| Protein GI | 194336335 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0870262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAT CCTGGAAAAC AGCACGTGTC TTTATAAGTA GCACATTTAG AGATATGCAG
GCTGAGCGTG ATTGTTTACG AGATATTGTA TTCCCTCAGC TTGATGACCG ATTAATGCAA
TTAAAGTCAC ACTTTGTACC AGTTGATTTA CGATGGGGAA TTGATACAGT GTCAGAATCA
GTGCAAGAAG ATAAAGAGGT GAAAGTTTTA AAAGTATGCC TTAATGAAAT TAACAGATGT
CGCCCATACT TATTAGTTAT ATTGGGAGAT CGTTATGGAT GGATTCCCCC GAGTGATCAA
ATATCAGCTG TTGTGAACGA AGCAGGATTT GATGTAGATA CAAAGGGGAA AAGTGTCACC
TCCCTTGAGA TAGAATATGC TCTGTTTTCA AATTCGGAAT TGGAGAAGAG GTGCTTCTTC
TATTTTCGAA GTGATTTACC TTATGAAAGA ATGACTGAAG CAGAGAGAGC TTTTTATTCT
GATCAATATA GTAATGAGTC TGCAGGCCGT GAGAATTACA ATCGTATTTT GGCTTTAAAA
AACCGGATTG AATCTGATCT GCAATTAAAG AAGAGGGTAA GGTATTATTC AGTTAAGTGG
GAAAATAACC GAATAAGTGG ATTAGAATCT TTTGCTAATC AGGTATTGGA AGATTTTTGG
AGTGAATTCA AGAAAGACTT TAGTTATGAA TCTATAGAAA CTAAGAGTTC GTGGTACGAA
ATAGAACGTC AGACAATAGC AGAGTTTATT GAAATCAACT CAAGAGACTT CATTGGTCAT
AAAGCTGTCT TAGATAGCAT ATTAAACTGG TCGTTAAATG AAAATAATAA TAAAGAATGG
GGGAAATGCA TTACAGGTTT TTCTGGTAAT GGTAAGAGTG TACTATACGC AAAATTGAAC
ACAGAACTTA GTAAAAGGGA TTGCCTTATT TTATCACACA CGGCTGGTAT TAGCATCAGA
TCAACCAGCG TGATAAATAT GCTTGATAGG TGGAATGCTG AACTTGAGGG ATATTTAAAC
ATCCCAGAAA AACATAATTC CAATGGAATA CAAACTTTCG ATAATAGAAA AGAACTATTT
AGCAGACTGT TAGAAGAAGT AGCTATTAAA ATTAGAGTAA TCTGTATTAT TGATGGGCTT
GAAAAATTTG AAAGGACACC GATTGCACGG TACCTTAGCT GGTTGCCTGA TGAATGGCCT
AAAAATGCAA GATTTATAGC AACTGCTATT GAAGGTGAAG AAACGACAAA TCTTTCTAAA
ATGAGTGGAT GCCATACAGA ACAGCTACCA TTAATTACAG AACAGGAATC AACAAAAATC
ATTCAAAATA TATGTGAGCG ATATCATAAA AATCTGCATC CTGATATTAT AGTATCAATA
ATCTCAAAAC CATTGTCAGA CAGAATAACA GCTGCAAGTA ATCCATTATG GATTTCCTTA
GTTGTTGAAC ATTTATTATT ACTTGATGAG GATGATTTTG CAGCAATAAT GAAGTTGCCT
GGAACTGCGG ATCAGAAGAT ATTTAGGTAT ATGTTACAAC TAGTTGATGA ATTTCCGCCA
GATACAGAAG ATCTACTACA TGTAATATTT AATAGATTCT ATATGCGATT CGCTGCACGC
ATAGAAGTTT CATGGATGTC AGAGATGCTT GACTTAATTG CCCTCAGTAG ATATGGCCTT
CGTGAAAAAG ATATACAAAA TATACTTGGC TTGGAAGATG ATCCGTCATT TTCCTTAAAG
TTTGCACTGG TAAGAAGATA CATACGTTCA CATATTATTT GGCGGGGCCA GCAAGGATTA
ATCGATTTCA GTCATTCACA CCTGAAAAGT TATTTAAGAA AAGAGAGGCT TTCAAACATC
CAATACAAAA AAGACTTATA TAAGAAGATT ATTGAATATC TGGAAGCTTC GGTGGATGGC
GATACCCTTA GACAGACAGA ACTGATGTAT TTCTATATGC AGATTGATGA ACCTGAATTT
GCTGCAAGAG GCATTGCATA TTATTGCAAT GACATTGACG ATAAAGAACT GGACGCTATT
AATAAAGTAT TTGAGGATGA ATTAGCAGCA CATAGCGAGG ATGAGACAAA TGAAGCATAT
GTATGGCTTC AAAAAATGGT TTATTTAGTA GATAAGACTT TCCTCGAAAA TAGAACTTTG
GAAAAAGAAG TAATTTTTCG GGTTTCACTA TTTTTAATCA GATTGAGCAG TGTAATACTA
GAGAACCTTT CAGAATGGTT GTCAACAAAC CTACAACTGG GATTACTGAA TGCGATTATC
AATATTGCTG ATAATCTGAA CAAACAGCAA CCGAATCGAC AGAATATTCT AAGATTGTTG
GAATGTCTCT ACGAAGGGGA AGGACGAATA TATTTGGAGC AGGAAAGATG CAACGAGGCA
GCCAGACTAT TTGAAAAAAG TGGTGAACTC TTAAACTCTT TACTTACTGA TGATGATGAA
AATATCAGCT ATTTTTATAG TTTGTCTATT TCATTGGAAC GTTTAGGGGA AACTTATAGT
AAACAGGCTA ATTATGATCT CGCTCTCGAA TACCAGAATA AAGCACTTTC ATTACGTGAA
AATCTCTTCA AAACTAATGA CAATGATAAC CATTTAAAGC ATCTTCTTGG AGCATCACAC
AATCATATTG GAGATATTTA CCTGCATAAA GGTGACTTGA GCAAAGCCAT GGAGCATTAT
CAAAAAGCCT TCGGTTTCAA TCTGACGGTT TTTGAAAACA GTGCGGACTA CATAAATGCC
CATCGACTTG CTGTCACATA TGAACGAATT GGTGTGACCT GCAATAATCA AAAAAGATAT
CAGCAGGCTC AAGAGAATTT TGAGAATGCT CTTCAAATAC TTAAAAAAGT CAATCAAAAC
AGACCTCACC AGTATGATAT CTTATTATCT ATATCCAGTG TATATATTAA TCTTATTGAT
ATGTTCCTGA GAAATAACGA AATAATTAAT GCAAATGAAT ACAGCCAAAA TTGTTTTTCT
CTATTGGATA CTATGATAAA AAGAAAGCCA GATTCTTTTC GGGCTGCATT GCATTTAGCA
GGTATTTATC ACATAATGGG AAAGAAGTTA TTTACTATCG AACATTATGA TTTAGCATTA
CAATCATATA CTGATGGTAT CTTTATGTGG AGGCAATTAT TAGTATCTAA TCCTGCAAAT
ACAAAAATAC TGTATGCACT ATCAGAGGAA TATTTGGGAA TCTCACAGAT CTATAGAAAA
CAGGGGAGTC TTGATAAGGC CATTGAGAAT CTGAATGAAT TTTTAGAAAT ATTTACTTCT
GAAGAAACAA ATTTTACTGA AATAGATAAC AAGTTAAAAA TATCCTCAGC CTACAGACAA
ATTGCAGAAC TTAAAAAATT AATGGGAGAC ATTATGGGTT CTATGTCTTT TTCACATCAG
GATATTGCAT TTTGCAATGA ACTTAAGAAA AGTTCAGATA ATGAGGAAAT AGACAGCAAT
TTAGTAGAGA GTTATGATCG ATTGGGTGAA CTAAATCTGT GTTATAATAA AATAAGTGAA
TCACTCGAAT TTCATAAAAA AGCATATACA CTCTGTACAG AGCTACATAA TCGGCATCCG
AAGAATGTTA CACTTATTCG TCAACTCGCT GTGTGCTGTG ATAATATTTC TGCTGTTTAT
TTAAGGTCTG GAAATATATC CGAATCCTTA AATTATTGCG CAAAAGCTAA TGAATATTTC
TATGAAATCC AGGTTAGTGA TACTGACAAT ACTCAGTATT TACAAGACCT ATCGGTAAAC
TGCGAAAGAC TGGGTAACAT TTACAACAAC AATGGTGAAA AAGAGAAAGC TCAGAATTTT
TATATAGACT CGTTGGAATA TGCTAAACGA CTATTAAAAC TAAAACCAGA TCAACTTGAG
TATCTTCGAG ATATTCTCAT ATCCCATTAT AATCTTGCAA TATTCTATCA GAGCTATAAC
GATCTCAATA AATCTATGGA ATATATTATT CAATGTAAAG AAAATCTAGA TTCCATGATT
GAACAAAATA TGACTATTGA TTTCCAAAGC CAACAAATAC AGCAGCAAAT TTACCAGATT
CTAATAAATA ACTTGCAATA A
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| Protein sequence | MNLSWKTARV FISSTFRDMQ AERDCLRDIV FPQLDDRLMQ LKSHFVPVDL RWGIDTVSES
VQEDKEVKVL KVCLNEINRC RPYLLVILGD RYGWIPPSDQ ISAVVNEAGF DVDTKGKSVT
SLEIEYALFS NSELEKRCFF YFRSDLPYER MTEAERAFYS DQYSNESAGR ENYNRILALK
NRIESDLQLK KRVRYYSVKW ENNRISGLES FANQVLEDFW SEFKKDFSYE SIETKSSWYE
IERQTIAEFI EINSRDFIGH KAVLDSILNW SLNENNNKEW GKCITGFSGN GKSVLYAKLN
TELSKRDCLI LSHTAGISIR STSVINMLDR WNAELEGYLN IPEKHNSNGI QTFDNRKELF
SRLLEEVAIK IRVICIIDGL EKFERTPIAR YLSWLPDEWP KNARFIATAI EGEETTNLSK
MSGCHTEQLP LITEQESTKI IQNICERYHK NLHPDIIVSI ISKPLSDRIT AASNPLWISL
VVEHLLLLDE DDFAAIMKLP GTADQKIFRY MLQLVDEFPP DTEDLLHVIF NRFYMRFAAR
IEVSWMSEML DLIALSRYGL REKDIQNILG LEDDPSFSLK FALVRRYIRS HIIWRGQQGL
IDFSHSHLKS YLRKERLSNI QYKKDLYKKI IEYLEASVDG DTLRQTELMY FYMQIDEPEF
AARGIAYYCN DIDDKELDAI NKVFEDELAA HSEDETNEAY VWLQKMVYLV DKTFLENRTL
EKEVIFRVSL FLIRLSSVIL ENLSEWLSTN LQLGLLNAII NIADNLNKQQ PNRQNILRLL
ECLYEGEGRI YLEQERCNEA ARLFEKSGEL LNSLLTDDDE NISYFYSLSI SLERLGETYS
KQANYDLALE YQNKALSLRE NLFKTNDNDN HLKHLLGASH NHIGDIYLHK GDLSKAMEHY
QKAFGFNLTV FENSADYINA HRLAVTYERI GVTCNNQKRY QQAQENFENA LQILKKVNQN
RPHQYDILLS ISSVYINLID MFLRNNEIIN ANEYSQNCFS LLDTMIKRKP DSFRAALHLA
GIYHIMGKKL FTIEHYDLAL QSYTDGIFMW RQLLVSNPAN TKILYALSEE YLGISQIYRK
QGSLDKAIEN LNEFLEIFTS EETNFTEIDN KLKISSAYRQ IAELKKLMGD IMGSMSFSHQ
DIAFCNELKK SSDNEEIDSN LVESYDRLGE LNLCYNKISE SLEFHKKAYT LCTELHNRHP
KNVTLIRQLA VCCDNISAVY LRSGNISESL NYCAKANEYF YEIQVSDTDN TQYLQDLSVN
CERLGNIYNN NGEKEKAQNF YIDSLEYAKR LLKLKPDQLE YLRDILISHY NLAIFYQSYN
DLNKSMEYII QCKENLDSMI EQNMTIDFQS QQIQQQIYQI LINNLQ
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