| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1126 |
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| Symbol | |
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| ID | 6463236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1164204 |
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| End bp | 1167398 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642727372 |
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| Product | helicase domain protein |
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| Protein accession | YP_002018022 |
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| Protein GI | 194336228 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTG TTCAGAACAG TGGGACAGAC CGGGTCATCG ACTACCTTCG ATCGAAACTC
ACCGCAGGTT GCCAGTTTGA TATGGTAACC CCCTCTTTTT CGCTGTTTGC CTTTTCCGGG
ATGCTTCAAG AAATGGTGGC ACTTTTAACA TGCCGTCTTC TTTTGCCGTC AACCATTACG
GAACTTTCAA TTCTTGGCTC TGAAGCCGAT CGCGCTGCTC GTAACCGGTT GCAAAACCGT
TGGATCGCAA GCCGCCTGCT GCAATGGCTT CAAAGCAAAA GCGAAGTGAA GCTTGCACCC
GGTGCCGTGC CGCAAGGCGC TTTAGTTGTT CGTGATGGCG ATGCAGTGCC AGAGCAGGTG
CTGCTTGGTT CGCTGGCATT CACTACTGAT GGACTTGGTT TGACTCCAGG CAACCCCTTG
AATCTCATTC AGGCTTCTGA AACGCCTGAA GAGGCGTTAT TGCTCAGCAA GTGGTTCGAT
GCTCAGTGGT CGGGTCTTGC AGAGAATCCA AAGGCCAAAA CAGAGCTGAT TGGTCTGATA
CAATCACTCG CTTCCCACAG AGAGCCCTTT CTCGTTTACT CGCTTATCCT CTATACTATC
TTTAGCGACC GTAACGAAGA TCTTGATGAA GAGCGTATCG TCAAGTCTGC TACAGGAATC
CGCAATACCG TTGTCTGGAA GAAGCTTTAC CGCTTTCAGC GTGATGGTGT TGTTGGTGCG
CTTGACAAGC TCAATCGCTT TGGTGGTTGC ATTATTGCCG ACAGTGTCGG ACTGGGAAAA
ACCTTTGAGG CTCTTGCCAT CATCAAGTAC CACGAACTCC GAAACGACCG GGTGCTGGTG
CTTTGCCCGA AGCGGTTGCG TGACAACTGG ACGCTCTATA AAGCCAATGA CCGACGGAAT
TTTCTTGCGC CAGATCGCTT CAACTATGAT GTCCTGAACC ATACCGATCT TTCCCGAGAC
GGCGGGTTCT CCGGCGATAT TGATCTTTCG CACGTCAATT GGGGAAACTA CGATCTTGTC
GTTATCGATG AATCGCACAA CTTCCGAAAC AAGGCGGCCA ACAAAGGGAA GGAAACACGC
TACGATCATC TGATGCGCAA GATTATCAAA GAGGGGGTCA AGACCCGGGT GCTCATGCTT
TCGGCAACGC CGGTAAACAA CCGGCTGGCT GATCTTCGTA ACCAGATTGC ATTTGCCACG
GAAGGCAACG ACACTGCCTT GCTTGCTCAT GGCATCAGCA GTATAGACAG CACTACGCGA
TTAGCACAGA AGCAGTTTAA TCGCTGGCTC GATCTTGATG AGGCGGAACG CATCCCGGTT
CGTCTGATTG AAATGCTCGG CTTCGACTAC TTTACCCTGC TGGATCTCCT GACCATCGCA
CGTTCCCGTA AGCATGTCGA AAAGTATTAT GGAATCTCCG AAACAGGACG CTTCCCTGAC
CGCCTGAAAC CAATCAATAT CCAGGCTGAC GTTGACCGGG CAGGTGAGTT TCGGCCTATC
AGGGAGATCA ATCAGGAGAT TCGCCGTCTG AACCTTGCCT CTTATGCTCC TTTGCGATAT
GTACTGCCGC ACAAGCAGGA GGCCTACGAC CGGAAGTACA GTACCCGTGT ACGGGGAGGC
GAAGGCTTTT TCCGGCAGGC TGACCGTGAA GAGAGTCTGA TCCACCTGCT TCGTATCAAC
ATGCTTAAGC GGATGGAGAG CGCCGTTCCA TCATTTGCGC TTACCGTTCA GCGCCAACTC
CGGGATGTTC AATCGATGCT GGAACGTATC GAGGCAAAAA CAAGCGAGCT TGAGGAGATT
GATATTGCCG ATATTGATCT TGACGACCCG GCATTTGAAA GCCTGCTCGT TGGTCGTAAA
GTCAAGGTAT TGCTTCAGGA TGTGGATCTG ATCAAATGGA AGCAGGAACT CATTGAAGAT
CGCAACAGGC TTGCCACTCT TTTCGCGGCG GCGGCCCAGG TTGATGCTGA GCGAGATGCC
AAACTGGCAG CTCTGCGTGA CGTTATTGCC GGGAAATGCC GGAACCCCAT CAATCCCGGT
AACCGCAAAA TCATCGTTTT TACAGCATTT ACCGATACGG CCCGATATCT TTACGAACAG
CTCGCTCCGT GGGCGAAGTC TGAGCTTCAC CTTGAGAGCG CTCTTATTGC CGGTTCCGGA
AGTAATCAGA CAACCATATC CGGATTGCGC AAGGATCAGT CCACTCTTCT CAGTGCGTTT
GCTCCCCGTT CCAAGGAGCG TCCAGAATCG CTTGCCATAG AGGGAACTAT CGATCTGCTC
ATCGCGACCG ACTGTATCTC CGAAGGGCAG AACCTTCAGG ATTGCGACTG GCTCATCAAC
TACGATATTC ACTGGAACCC CGTGCGAATC ATCCAGCGTT TTGGCCGGAT AGACCGTATC
GGATCGCCGA ACAGTTGCAT TCAGCTTGTC AACTTCTGGC CAAATATGGA GCTTGAGGAG
TACATCAACC TTGAACAACG GGTAAGCGGA AAAATGGTAC TGCTCGATAT CTCCGCTACG
GGTGAGGAGA ACCTTATTGA GCAGCAATCC GGCAATCAGA TGAACGATCT GGAGTATCGC
CGCAAGCAAC TTCTCAAGCT TCAGGAAACC GTTATCGATC TGGAGGATCT CTCCTCCGGA
GTCTCCATCG CCGACCTCAC CCTGACCGAC ATTCGCCTTG ACCTTGCCCA ATATCTGAAA
GCCAATCCCG GAATATTGGA GACAATACCA CCGGGAAGCT TTGCCGTTAC CACCACAGCA
GAGGCGGATA TCGCTCCGGG CATTATTTTC TGTTTGCGTG CCGAGGGTGA AGCGGCCCGG
CGAATTCCTG AAGCCGGGTA TCCGCTTGGC ACCCATTACC TCGTCCATGT TGGTGACGAT
GGCTCGGTGA TTCTGCCCTA CACACAAGCC AAGCAGATTC TTGACCGGCT CAAGCGTCTC
TGCCTCGGTC GTGATATGGC CGATGCCGGA GCGTGTGCCC GTTACGACAA GGCGACAAAA
CAGGGTGAAG AGATGCTTGC AGCACAACGC CTGCTTGCTG CAGCCGTAGC CTCCGTGGCT
GGAAAGAATC AGGAACGAGC CGTTGCAAGC CTGTTTACTC CCGGCGGTAC GCACGCCATG
AAGGGAGAAT TCGCTGGCAT CAACGATTTT GAGGTGATGG CATACCTTGT TATTCTGCCG
GAGGCAACCG TATGA
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| Protein sequence | MKLVQNSGTD RVIDYLRSKL TAGCQFDMVT PSFSLFAFSG MLQEMVALLT CRLLLPSTIT
ELSILGSEAD RAARNRLQNR WIASRLLQWL QSKSEVKLAP GAVPQGALVV RDGDAVPEQV
LLGSLAFTTD GLGLTPGNPL NLIQASETPE EALLLSKWFD AQWSGLAENP KAKTELIGLI
QSLASHREPF LVYSLILYTI FSDRNEDLDE ERIVKSATGI RNTVVWKKLY RFQRDGVVGA
LDKLNRFGGC IIADSVGLGK TFEALAIIKY HELRNDRVLV LCPKRLRDNW TLYKANDRRN
FLAPDRFNYD VLNHTDLSRD GGFSGDIDLS HVNWGNYDLV VIDESHNFRN KAANKGKETR
YDHLMRKIIK EGVKTRVLML SATPVNNRLA DLRNQIAFAT EGNDTALLAH GISSIDSTTR
LAQKQFNRWL DLDEAERIPV RLIEMLGFDY FTLLDLLTIA RSRKHVEKYY GISETGRFPD
RLKPINIQAD VDRAGEFRPI REINQEIRRL NLASYAPLRY VLPHKQEAYD RKYSTRVRGG
EGFFRQADRE ESLIHLLRIN MLKRMESAVP SFALTVQRQL RDVQSMLERI EAKTSELEEI
DIADIDLDDP AFESLLVGRK VKVLLQDVDL IKWKQELIED RNRLATLFAA AAQVDAERDA
KLAALRDVIA GKCRNPINPG NRKIIVFTAF TDTARYLYEQ LAPWAKSELH LESALIAGSG
SNQTTISGLR KDQSTLLSAF APRSKERPES LAIEGTIDLL IATDCISEGQ NLQDCDWLIN
YDIHWNPVRI IQRFGRIDRI GSPNSCIQLV NFWPNMELEE YINLEQRVSG KMVLLDISAT
GEENLIEQQS GNQMNDLEYR RKQLLKLQET VIDLEDLSSG VSIADLTLTD IRLDLAQYLK
ANPGILETIP PGSFAVTTTA EADIAPGIIF CLRAEGEAAR RIPEAGYPLG THYLVHVGDD
GSVILPYTQA KQILDRLKRL CLGRDMADAG ACARYDKATK QGEEMLAAQR LLAAAVASVA
GKNQERAVAS LFTPGGTHAM KGEFAGINDF EVMAYLVILP EATV
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