| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0857 |
|---|
| Symbol | |
|---|
| ID | 6461125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 895819 |
|---|
| End bp | 896652 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642727112 |
|---|
| Product | NAD synthetase |
|---|
| Protein accession | YP_002017762 |
|---|
| Protein GI | 194335968 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0171] NAD synthase |
|---|
| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTC AGGATCTCCA TCTCGATTAT CACCTGGTAG AGGATATTCT CAAAGCATTT
CTTTTCAATG AGCTTCGAAA GTTCGGATTC AGTTCGGTCG TACTTGGTCT GTCAGGCGGT
ATCGATTCGG CTGTTGTCTG TGAACTGGCG GTTCGCGCAC TGGGTAGGCA GAACGTTTTA
GGGCTTATGA TGCCCTATGC TTCAAGCAGT ATGGAAAGTC TCGAACATGC GGAACTCATG
ATTAAAAAGC TCGGCATACA GGCCGAAGAG ATGCCGATTA CGCCTGTTGT CGATGCTTTT
TTTTCCTCTG TACCGGAAAA TCAGTTGTTG AGAAGGGGCA ATATTATGGC GCGCACGAGG
ATGATATTGC TCTATGATGT TTCAGCAAGA GATGGTCGCC TGGTCACCGG AACAAGCAAC
AAAACAGAAC TGCTTCTTGG TTACGGCACC CTCTTTGGCG ATATGGCTTC AGCCATCAAT
CCAATTGGCG ATCTCTATAA AACCCAGGTA CGAGGTCTTG CCCGTCATCT CGCCATTCCG
GAGCCCCTTA TTGTCAAAGC GCCTTCAGCC GACCTCTGGG AAGGACAGAG CGATGAGGAT
GATCTCGGAT TCAGTTATGA AGCCGTTGAT TTGCTCCTCT ATATGATGCT TGAAAAGAGA
ATGGATAAAC ATGCGATCCT TGGCCAGGGG ATAGAGGAAC CCTTCTATGA CCGTGTCAGG
AAGATGGTTG TCAGGAACCA GTACAAAAGG ATGATGCCCG TTATAGCCAA ACTATCAGGC
CGGACACCCG GTATCGATTT CCGCTATGCA AGAGATTGGC AGGAGGTGAG GTAG
|
|---|
| Protein sequence | MKVQDLHLDY HLVEDILKAF LFNELRKFGF SSVVLGLSGG IDSAVVCELA VRALGRQNVL
GLMMPYASSS MESLEHAELM IKKLGIQAEE MPITPVVDAF FSSVPENQLL RRGNIMARTR
MILLYDVSAR DGRLVTGTSN KTELLLGYGT LFGDMASAIN PIGDLYKTQV RGLARHLAIP
EPLIVKAPSA DLWEGQSDED DLGFSYEAVD LLLYMMLEKR MDKHAILGQG IEEPFYDRVR
KMVVRNQYKR MMPVIAKLSG RTPGIDFRYA RDWQEVR
|
|---|
| |