| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0836 |
|---|
| Symbol | |
|---|
| ID | 6461180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 873871 |
|---|
| End bp | 874185 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642727088 |
|---|
| Product | plasmid stabilization system |
|---|
| Protein accession | YP_002017742 |
|---|
| Protein GI | 194335948 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3668] Plasmid stabilization system protein |
|---|
| TIGRFAM ID | [TIGR02385] addiction module toxin, RelE/StbE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00374774 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGTT TGTTAGCATG GTCACCCGAA GCTCTTGAAG ATGTTGAGTT GATTGCCTCT
TTCGTAGAGC GCGATTCACT TTGGTATGCT AAAATTGTTG CCTCAAAAAT TGTCAGCGCT
GCCGAAAATA TACCATCTAA TCCCGAAATG GGACGTATGG TTCCAGAGAT TGCTGACAAA
AACATCCGTG AACTGTTTGT TTATAGTTAC AGGTTGATCT ATCGGATTGA ACCTGAACGC
ATTGTTGTTG TGGCAGTCAT TCATGGCAGT CGTCTTTTGC AGCCCTTCGT TCAGCGTATT
GAAAGCGGCA TATAA
|
|---|
| Protein sequence | MACLLAWSPE ALEDVELIAS FVERDSLWYA KIVASKIVSA AENIPSNPEM GRMVPEIADK
NIRELFVYSY RLIYRIEPER IVVVAVIHGS RLLQPFVQRI ESGI
|
|---|
| |