Gene Ppha_0730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0730 
Symbol 
ID6461423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp762767 
End bp763300 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content49% 
IMG OID642726987 
Producthypothetical protein 
Protein accessionYP_002017642 
Protein GI194335848 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGAA TCAAGGCTAA ACGGATCGGG TTCAGGATTG ATATGACTCC CATGGTGGAT 
GTCGCGTTTC TTCTGTTGAC CTTTTTCATG CTCACCACGA AGTTCCGGCC TCCTGAGGTT
GTCAAGATCG ATCTCCCCTC ATCTCATTCG GAGTTGAAAC TTCCCGAATC AGATGTTCTG
ACGGTGACCG TTGGTGGTGA CAATACCTTT TTCATGGGGG TCTCCTCACA GCAGTCGAGG
GTGAAAATAT TCAATGCTGT CGTCAAACCG AAGCTTCAGG CGGCGGGATT ATCTTCGGTT
GCAGTAGCGG ATTCACTGAA AAAATTCAAA CTTGCTGAAA ATTTCCGGGT AGGGCGCGAT
GAACTCGACA AATTTGTTGT TATGGCTCGC TTTGCCGATC AGAAACTTCG TCCGGTAATC
CGTGCTGATG CCGATGCGGG ATTTGATGCC GTCAACCACG TTATCAAGGT CTACAAAAAG
GCAAACCTGC TTACCTTCAA CCTCATTACC GTTCTTGAAA GGGAGGCACG CTGA
 
Protein sequence
MSRIKAKRIG FRIDMTPMVD VAFLLLTFFM LTTKFRPPEV VKIDLPSSHS ELKLPESDVL 
TVTVGGDNTF FMGVSSQQSR VKIFNAVVKP KLQAAGLSSV AVADSLKKFK LAENFRVGRD
ELDKFVVMAR FADQKLRPVI RADADAGFDA VNHVIKVYKK ANLLTFNLIT VLEREAR