Gene Ppha_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_0601 
Symbol 
ID6461753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp582398 
End bp582724 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content45% 
IMG OID642726869 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002017524 
Protein GI194335730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATC TGAAATACCA GCCAGTACCA TACAATGTTG AGGAGGAGAT ATGCAAAAAC 
CTTCAAGACG AGAATTTTCG CAGAGAATAT GAAGCACTGG AACCAAAATA CGCATTGATC
AGGGAGCTGT TATCTGCACG ACAGCTCTCA GGCATGACGC AAGAAGCTGT GGCTCTGAAA
ATCGGGACGA CCAAAAGTGC CATCTCCAGA CTGGAATCCG GCAGCAAGCA TTCTCCCTCT
CTTACCACAC TGAGAAAATA CGCTGAAGCA GTTAATTGCG AACTGGAAAT CAAACTGAAA
CCAAAACAGC AACCGAAAAC GATCTGA
 
Protein sequence
MDDLKYQPVP YNVEEEICKN LQDENFRREY EALEPKYALI RELLSARQLS GMTQEAVALK 
IGTTKSAISR LESGSKHSPS LTTLRKYAEA VNCELEIKLK PKQQPKTI