| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_0447 |
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| Symbol | |
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| ID | 6462192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 432043 |
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| End bp | 434013 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642726734 |
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| Product | putative NADPH-dependent glutamate synthase small subunit |
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| Protein accession | YP_002017390 |
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| Protein GI | 194335596 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.595012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGC TCTCTCTTAT CATCGATCAG CAGGCAGTTA CAACAGCACA GGGAACTTCG
ATTCTTGAAG CGGCTGCGGA GGCTGGTATC ACGATTCCAA CGCTCTGCTT TCTCAACTCC
CTGCACGAGA CGGGGTCGTG CTGGATGTGT ATTGTTGAGA TCAAGGGCAA AAATCGCTTT
GTTCCGGCAT GTGATACACT GGCTTCCGAG GGGATGGTTA TTGAAACGGA CAACGCGGAG
ATCAGCGCCA TGAGGCGTCA GAGCCTTGAA CGGATCATTG AAGAGCATGG AGGTGATTGC
ATGGGGCCTT GTGAGCTCTC CTGCCCTGCA GGTTGCAATA TCCCGGATTT TGTCGCGGCC
ATTGCCCGCC ATGATGAGCG TGAGGCCATA CGGATTATCA AGCAGAGCAT TCCTCTCCCC
GGAATTCTCG GTCGTATCTG CCCGGCTCCC TGCGAGGATG AGTGCCGCCG GCACGGTGTA
GACCAGCCGG TCTCGATCTG TGCCCTGAAA CGCTATGCTG CCGACAGGGA TTCGGCGCAA
CCCGAGCGGT TCATCCCTGA AATTGCTCCG AAAACAGGGA AAAAAGTGGC CATTGTCGGC
GCCGGAGCTG CCGGCCTTTC CGCTGCCTGG TTTTTGCTCA GCAAGGGACA TGGGGTGACC
ATTCTCGAGT CGAGTGAGGA GGCTGGCGGA ATGCTGCGCT ACGGCATTCC CCGCTTCCGG
CTTCCTGAAA CCGTTATCGA CAGTGACATT GCTCCCCTGC TCGAGATGGG TCTGGAGTTC
CGTTTCAATA CCACTTTCGG TCAAGAGGTC ACCCTTGAAA CGCTTCAGGC TCAATTTGAT
GCTGTTTTTC TTGCGATTGG CGCCCAAAAG GCTTCGAAAA TGCATATTGC CGGTGAAGAT
GAGCCTGGCG TGACGAGCGG CATCGCCTTT CTGCGAAGGG TTGCTTTAGA TGATCAGCCT
CATTTGGAGG GGCGGGTCGT CGTTACCGGT GGAGGCAACA CCGCCATTGA TGCGGCAAGA
AGCGCAATGC GTCTTGGAGC TTCTACGGTT ACCATCCTCT ACCGCCGTTC AAGAAAAGAG
ATGCCTGCCA ACGCATCTGA AATCGATGAG GCTCTGTCTG AAGGGATCTC GCTTGTTGAA
TGGGCTGCCC CGACTGCAAT CAGGAGGCTG AATGATGCTC TTGAAATAAC GGCTATCATG
ATGAAGCCAG GCGCGCCTGA CCAATCGGGG CGAAGGAGAC CGGTACCTGT TGAGGGATCG
GAATTCACCA TCATGGCCGA CACGGTCATC TCGGCTATCG GGCAGCAGAT TGACCGCTCT
GTAGCAGATC ATGCCGGTAT CGGCAGCACG GAGCACGGTG AAGTGCTGGT TCACCCCGAG
ACCCTGCAAT CGGCAAGACC CTGGCTGTTT GCAGGTGGAG ATTGTGTAAC CGGGGCTGAT
ACGGCCATCC AGGCCGTTGA GCAGGGAAAA CGGGCTGCTT ATGCCATCAA CCTTTTTTTG
GGGGATGAAG CCGTTACGGT TCCGAAAGCC TCTTTTAACT CCTCCTATGG AGCGCGTGAT
GAGGCTCCAG GGGCATTCTA CGACAAGGCT GAACCGGCAG AAAGGGTGGC TCTGGCTGAA
CTGCTGCCGA CCGATCGCAC CAACAGCTTC TGCGAAGTGG TTACAGGATA CACGGAAACC
CAGGCCCGTG AGGAGGCGCT GCGCTGCCTG CAATGCCGCT GCAATGCCGT CAACGATTGT
CGGTTGCGGG TACTCGCCTC CCGTTACCTG CCCGTTGAAG CTGCACAAAA GCATGATCAT
CAGGGGTTTT ACCGGGCAGA AAATGCCGAT ATGGGCATGG AACGCGAAAA GTGCGTTGAC
TGTGGCATCT GTGTGCGGAT GCTTGAGGAG TTTGATGGAG CTATCGACAT TGCCGTCATG
GCTGAAAGCT GCCCCACAGG AGCATTGTCG CGCCCCCCGG GCCTCTCCTG A
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| Protein sequence | MKQLSLIIDQ QAVTTAQGTS ILEAAAEAGI TIPTLCFLNS LHETGSCWMC IVEIKGKNRF
VPACDTLASE GMVIETDNAE ISAMRRQSLE RIIEEHGGDC MGPCELSCPA GCNIPDFVAA
IARHDEREAI RIIKQSIPLP GILGRICPAP CEDECRRHGV DQPVSICALK RYAADRDSAQ
PERFIPEIAP KTGKKVAIVG AGAAGLSAAW FLLSKGHGVT ILESSEEAGG MLRYGIPRFR
LPETVIDSDI APLLEMGLEF RFNTTFGQEV TLETLQAQFD AVFLAIGAQK ASKMHIAGED
EPGVTSGIAF LRRVALDDQP HLEGRVVVTG GGNTAIDAAR SAMRLGASTV TILYRRSRKE
MPANASEIDE ALSEGISLVE WAAPTAIRRL NDALEITAIM MKPGAPDQSG RRRPVPVEGS
EFTIMADTVI SAIGQQIDRS VADHAGIGST EHGEVLVHPE TLQSARPWLF AGGDCVTGAD
TAIQAVEQGK RAAYAINLFL GDEAVTVPKA SFNSSYGARD EAPGAFYDKA EPAERVALAE
LLPTDRTNSF CEVVTGYTET QAREEALRCL QCRCNAVNDC RLRVLASRYL PVEAAQKHDH
QGFYRAENAD MGMEREKCVD CGICVRMLEE FDGAIDIAVM AESCPTGALS RPPGLS
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