Gene Pnuc_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1834 
Symbol 
ID5053179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1914890 
End bp1915423 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content48% 
IMG OID640472007 
Producthypothetical protein 
Protein accessionYP_001156611 
Protein GI145590014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.102941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAT TTTGGAACTT TGCCCTTTTC CAGTTGGGTT GGTTTGCCTG TGTATTGGGG 
GCTGCTCATC AGAAGGTATT TTGGGCAGTT ACAGGAACTC TGGCTTATAT CGTATTGCAT 
GCCTGGCATT CACCTTTTCC AAAAGCAGAG ACTAGACTCT TACTCAAAGC ACTGGCTTAT 
GGGGTGATTA CTGACACTCT GATTGTGAAT TTAGGGTGCT TGACCTTCCG CGATCCCTGG 
CCTTCATCCC ATTTATCGCC TTTATGGATG TGGGTTTTGT GGGTCTTGGT GGCAACTACT 
ATTAATAAAT CTTTAAGCTG GTTGCGGGGT AGACCTGTTC TTGGGGCGGT TTTGGGCGGG 
ATTTGCGGTC CAATGTCTTA TGAGGCCGGT ATTCGAATGG GGGCTGGAGC CTGGGAGCCG 
GGAGGTCGAG TGACTGGATT TATCCTCGTA GGAATAGCCT GGGCAATTGC CATACCCCTC 
TTCTTTTACT GGGATGAAAG CACCACTGAA GACACTTTAC TGAAAAATCA GTAA
 
Protein sequence
MAKFWNFALF QLGWFACVLG AAHQKVFWAV TGTLAYIVLH AWHSPFPKAE TRLLLKALAY 
GVITDTLIVN LGCLTFRDPW PSSHLSPLWM WVLWVLVATT INKSLSWLRG RPVLGAVLGG 
ICGPMSYEAG IRMGAGAWEP GGRVTGFILV GIAWAIAIPL FFYWDESTTE DTLLKNQ