| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1580 |
|---|
| Symbol | |
|---|
| ID | 5053854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 1651902 |
|---|
| End bp | 1652231 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640471753 |
|---|
| Product | regulatory protein, ArsR |
|---|
| Protein accession | YP_001156358 |
|---|
| Protein GI | 145589761 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0640] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CAGATGCTAT CAAGGCTTTT CTGGCTCTCG GTCAGGAGAC ACGTTTAAAT
GTATTTCGTC TGGTTGTGCA GCGCGGTGAC GTTGGACTAA CACCTAGCGA GATCATTGAA
AAGTTGGGTA TCCCCAATGC CACATTGAGC TTTCATTTAA AGGAATTGGT AGAAGCGGGA
TTATTGAACG TCGAGCGCCA AAGTCGGAAC CTGATCTACA GTCCAAATGC GCAGCTAGTT
GAGGAATTAA GCGGGTTCTT GCTTGAAAAC TGCTGCGGCG GTCAATCATG CGCGCCCATT
TCTATTGTTA AGAAGGCTAA AGCTAAATGA
|
|---|
| Protein sequence | MKNTDAIKAF LALGQETRLN VFRLVVQRGD VGLTPSEIIE KLGIPNATLS FHLKELVEAG
LLNVERQSRN LIYSPNAQLV EELSGFLLEN CCGGQSCAPI SIVKKAKAK
|
|---|
| |