Gene Pnuc_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0885 
Symbol 
ID5052344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp878232 
End bp879122 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content46% 
IMG OID640471043 
Producthypothetical protein 
Protein accessionYP_001155665 
Protein GI145589068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00140795 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGAAA AAAGTAAGTT GTTGGTTTTG AGATTTTTTT GGCTATGTTT GTTTGGCTTA 
TTTGCCCAAC AAATTCAAGC CCAAGAAATA GAGGCGCGTG CATATTCCAA TGCGCCAATC 
AACATGAACT TCCTCACAGG CGGTATTGCG CAAGCTAAAA GCGGTGCATA CACAATAACA 
ACCGAAGCGG CAAGCCTTAC TCATGTTCTA GATGTTTTTG GGCAATCGGG AAGGCTTACG 
CTCGTAGTTC CGTTTGCTCA GCTCTCTGGT ACTGGGTCTG TAGGTGGACA AGCAATTAAT 
GCGTCCGCAG AAGGTCTATC TGACCCGATG ATTAAAGCTT CAGTCAATTT ATATGGAGCG 
CCCGCCTTAT CCATCGAGCA ATTTAAAGGG TATGAACAGG ATTTAATTAT TGGCGCTAGT 
TTGGCCGCCA CTATACCTTG GGGACAATAC AACAACAGTC AATTAGTTAA CGTGGGTGCT 
AATCGATCAG TCATTCAACC GGGATTTGGT GCATCAAAGG CGGTGGGTCC ATGGCGCCTT 
GAACTGGCTG GCATGGCATC AATCTACACC AGCAATACCA GTTTTTTGGG AAGTAATACG 
CTTACCCAAA ACCCCATTTA TTCTGCTGAA ACCCACGTGA TTTACTACTT CCCCAATACC 
GCATGGATCT CTGCGGATGC CACGTATTTC ACGGGTGGTC AAACCTATGT CAATGGTATG 
GCTGCAGGTG GCACTCAAGA GAACTGGCGC TTTGGCACCA CCCTTTCCTA CCCAATTGAT 
AAACAAAATT CGATACGACT AACTGGAAGT ACCGGCATTT ATTCAAGAAC CAACACTGAC 
TATAACGCTG TAGGTATTTC ATGGCAGTAT CGTTGGGGTG GCTGGCCTTA G
 
Protein sequence
MAEKSKLLVL RFFWLCLFGL FAQQIQAQEI EARAYSNAPI NMNFLTGGIA QAKSGAYTIT 
TEAASLTHVL DVFGQSGRLT LVVPFAQLSG TGSVGGQAIN ASAEGLSDPM IKASVNLYGA 
PALSIEQFKG YEQDLIIGAS LAATIPWGQY NNSQLVNVGA NRSVIQPGFG ASKAVGPWRL 
ELAGMASIYT SNTSFLGSNT LTQNPIYSAE THVIYYFPNT AWISADATYF TGGQTYVNGM 
AAGGTQENWR FGTTLSYPID KQNSIRLTGS TGIYSRTNTD YNAVGISWQY RWGGWP