| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0635 |
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| Symbol | |
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| ID | 5053730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 623928 |
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| End bp | 626048 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470789 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001155417 |
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| Protein GI | 145588820 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGC AGTTCAAGCG AAGGCCTATC GCCCTATTTT GCGGCGCCCT ATTTGCATTT
GGCTTATACA CATCTGCATT TGCACAAAGC TCTCAATCTA CTGTCATCGT GACAGGCTCA
CGATTTGAAG AAAACCTCAA TGAAGTTCCG GCGAATGTTC AGGTAATTAC TCGAGATGAG
ATTGCCAATT CAACATCGAG CAATATTCCA GATGTTTTAT CTCAAATCGG CGGCCTCAAT
GTGCGAAGCA CTAATCCAGG ACAACTCAAT CTTGATGCAA CTGTCGACAT GGGTGGTTAT
GGTGTGGGTG CAAATAGCAC CACATTAATT TTAGTTGATG GCCAAAGAAT TAATTCCATT
GATTCAACAA GTATTAGCTG GGAGTCAATT CCCATCGACT CCATTGATCG CATCGAGGTA
TTACAAGGCG GAGCGAGCGT TCAATACGGA AACGGCGCCG TTGGTGGCGT TATTAACATT
ATTACCAATG GAAATACTTC GAAGTTGAAT CAAGCTAGCG TTAGTTACGG CAGCTATGGA
ACCCTAGTGA ACAATGCAAT ATTGCGCGAT AGCTTTGAAG ACACTACATA TCAATTAACG
GCCAATACCT CCAATACGCA AGGTTGGAGG CAAAATTCCG CAGCAAATGC TTATGCCTTT
GATGCGAAGA TCACCCAAAA ATTTGGCGGG ATAGACAAAA TCTATACCGA CTTCTTTTAT
GGTTACACGA ATGCGCAAAA CCCAGGCGGT GTTGTTGGGC AAGTTGGGGA AGGAAATCCT
CAATCTGCCA AGTTCAATAA TATTGGCTCA AACACCACAA CCAACAATGC GGGGGTTCGA
TTTGGCGGAA CCAAAGGGCT AGGGGATGGT TACATCGGAG AGTTAGATGC TTCCTATACC
AATAGAACAG TCTTTTATTA CAACCCCTTT TACGATAGTG ATGCCGCTCT CAATGTAACG
CCCTACCCTA TTGTGGGAGC AAGTAATAGC AACCTATCCG GCTGGCAATT GAACTTAACT
CCTCGCTTAA AGGCAGACTT AGGGCCATTG GGCACGGGGA TTGTGGGATA TGAATTAAAC
AAGGCTGGCC AAGGCGGAAC AAATGCTTTT GGTTCTGCCG CCACCAACAT TTTGACGCAA
GACTATTACA TTTCCAATCC CAATGGACTG CCTTATAACT CTCAACATGC ATCCGTTCTG
AATCAATCGT TTTATGCAAT TCTTAAATTA CCGATTACGA AAGAACTCAG TCTTGATGGT
GGAGCGCGCC ATCAAATGCA ACAAGCCAGC ACTTATGACT CAAACATTTA CTCACCGAAT
GGTGCCGTCA CTGCTGATCA AACCTATTCA GCTAATGCAG GGGATGTTGC CTTAAATTTT
AATTACGCAG GCAAGCAAAA AGTCTATGTG AAGTGGAATC AGTCTTATCG CTTTCCCAAT
ATTGATGAAT TCTGGGGATT TGATCCCAAC ACTTATAACC GTGTGTTTAA CGGGATCCTT
AGACCGCAAA TAGCACAAAC GTATGAGGTC GGCGGTAACT GGATGTGGAG CAGCGTCAGA
GTGAATGGAT CTATTTTTTC ATCTAGCTCT CAAAATGAAA TCATGTATGA CCCTTCTTCA
GGCTTAAATT ACAACTCGCA GTACAACGTT AATCGCCGCG GTGTAGCGAT GGATACATCA
TCCAACATTA CTAATCGACT GAGCCTTGCA GGTGGCGGTA AATTTCAGCA TTCTTACTAT
GCTGATGGTC CCTACGCTGG AAATGCTATT CCCGTAGCCC CCAACTTACT ACTAAACGCC
AGAGCAAGTT ATTCAATAGA TGAAAATTGG TCTGTTGGCG GCGTAGTGAA TTACGTTAGT
AGCCAACACT ATGATGCAAG CCAAATTTAT TACAGTTCAC TTGCGCTCAT GCCATCCTAT
ACAGCTGGTG ATGTGTATAT AAATTACAAG ACTGGAAATT TTGATGCAAA GTTCACGATT
AAAAACGTAG GGAATGCCTC GTATGCGAGT TACGGGGGAT ACACCAATGT CATGGCAGCG
AATGGAACGT TTAGCAATAA TTACTACTAT TACCCAAGCG ATGGCAGAGC GTTTTATATC
ACCGGAAAAT ACAACTTCTG A
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| Protein sequence | MKQQFKRRPI ALFCGALFAF GLYTSAFAQS SQSTVIVTGS RFEENLNEVP ANVQVITRDE
IANSTSSNIP DVLSQIGGLN VRSTNPGQLN LDATVDMGGY GVGANSTTLI LVDGQRINSI
DSTSISWESI PIDSIDRIEV LQGGASVQYG NGAVGGVINI ITNGNTSKLN QASVSYGSYG
TLVNNAILRD SFEDTTYQLT ANTSNTQGWR QNSAANAYAF DAKITQKFGG IDKIYTDFFY
GYTNAQNPGG VVGQVGEGNP QSAKFNNIGS NTTTNNAGVR FGGTKGLGDG YIGELDASYT
NRTVFYYNPF YDSDAALNVT PYPIVGASNS NLSGWQLNLT PRLKADLGPL GTGIVGYELN
KAGQGGTNAF GSAATNILTQ DYYISNPNGL PYNSQHASVL NQSFYAILKL PITKELSLDG
GARHQMQQAS TYDSNIYSPN GAVTADQTYS ANAGDVALNF NYAGKQKVYV KWNQSYRFPN
IDEFWGFDPN TYNRVFNGIL RPQIAQTYEV GGNWMWSSVR VNGSIFSSSS QNEIMYDPSS
GLNYNSQYNV NRRGVAMDTS SNITNRLSLA GGGKFQHSYY ADGPYAGNAI PVAPNLLLNA
RASYSIDENW SVGGVVNYVS SQHYDASQIY YSSLALMPSY TAGDVYINYK TGNFDAKFTI
KNVGNASYAS YGGYTNVMAA NGTFSNNYYY YPSDGRAFYI TGKYNF
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